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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170272634
CERL01003292
456267
Gammaproteobacteria
GAA
Phe
>WENV170272641
CERL01003847
452881
Gammaproteobacteria
TGT
Thr
>WENV170272670
CERL01006686
453897
Gammaproteobacteria
TAC
Val
>WENV170272687
CERL01007600
12370
Gammaproteobacteria
GCT
Ser
>WENV170272688
CERL01007604
276971
Gammaproteobacteria
ACG
Arg
>WENV170272710
CERL01009454
276970
Gammaproteobacteria
CCG
Arg
>WENV170272714
CERL01009974
452332
Gammaproteobacteria
GTG
His
>WENV170272726
CERL01010947
276972
Gammaproteobacteria
CCA
Trp
>WENV170272768
CERL01014943
454969
Gammaproteobacteria
GTT
Asn
>WENV170272829
CERL01021505
278982
Gammaproteobacteria
CCG
Arg
>WENV170272904
CERL01029276
276970
Gammaproteobacteria
CCG
Arg
>WENV170272982
CERL01037613
458525
Gammaproteobacteria
TAC
Val
>WENV170273111
CERL01049947
276974
Gammaproteobacteria
GGG
Pro
>WENV170273118
CERL01050607
457453
Gammaproteobacteria
TTT
Lys
>WENV170273119
CERL01050607
457453
Gammaproteobacteria
TTT
Lys
>WENV170273138
CERL01052578
297860
Gammaproteobacteria
GAC
Val
>WENV170273139
CERL01052578
274775
Gammaproteobacteria
GAC
Val
>WENV170273163
CERL01055465
273122
Gammaproteobacteria
CAT
Met
>WENV170273173
CERL01056293
275002
Gammaproteobacteria
ACG
Arg
>WENV170273174
CERL01056293
275002
Gammaproteobacteria
ACG
Arg
>WENV170273175
CERL01056293
275002
Gammaproteobacteria
ACG
Arg
>WENV170273283
CERL01068483
274148
Gammaproteobacteria
GTC
Asp
>WENV170273314
CERL01072237
273844
Gammaproteobacteria
CCG
Arg
>WENV170273367
CERL01079276
47153
Gammaproteobacteria
GGA
Ser
>WENV170273472
CERL01092558
278942
Gammaproteobacteria
CCG
Arg
>WENV170273480
CERL01093328
112814
Gammaproteobacteria
GAG
Leu
>WENV170273550
CERL01101318
452377
Gammaproteobacteria
GTT
Asn
>WENV170273573
CERL01103671
459319
Gammaproteobacteria
GAA
Phe
>WENV170273625
CERL01109886
276372
Gammaproteobacteria
ACG
Arg
>WENV170273702
CERL01117738
452412
Gammaproteobacteria
GCC
Gly
>WENV170273820
CERL01162357
274776
Gammaproteobacteria
GGG
Pro
>WENV170273956
CERL01204951
282333
Gammaproteobacteria
GAC
Val
>WENV170274103
CERL01242829
456247
Gammaproteobacteria
CCA
Trp
>WENV170274106
CERL01243665
276185
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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