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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170278353
CERQ01083044
454971
Gammaproteobacteria
TTT
Lys
>WENV170277731
CERQ01017568
656944
Gammaproteobacteria
CCT
Arg
>WENV170277992
CERQ01042706
270982
Gammaproteobacteria
GAT
Ile
>WENV170277617
CERQ01006313
276974
Gammaproteobacteria
GGG
Pro
>WENV170278322
CERQ01079573
276974
Gammaproteobacteria
GGG
Pro
>WENV170277629
CERQ01007164
276971
Gammaproteobacteria
ACG
Arg
>WENV170279079
CERQ01234017
451784
Gammaproteobacteria
GAA
Phe
>WENV170277856
CERQ01030426
451982
Gammaproteobacteria
GGC
Ala
>WENV170278434
CERQ01093678
273857
Gammaproteobacteria
TGG
Pro
>WENV170278271
CERQ01074161
655196
Gammaproteobacteria
TCC
Gly
>WENV170277810
CERQ01025395
278982
Gammaproteobacteria
CCG
Arg
>WENV170278232
CERQ01069026
273851
Gammaproteobacteria
GTC
Asp
>WENV170278435
CERQ01093678
273858
Gammaproteobacteria
TCT
Arg
>WENV170277984
CERQ01042399
113485
Gammaproteobacteria
CAA
Leu
>WENV170277986
CERQ01042486
113485
Gammaproteobacteria
CAA
Leu
>WENV170278691
CERQ01120516
458525
Gammaproteobacteria
TAC
Val
>WENV170278736
CERQ01124106
276972
Gammaproteobacteria
CCA
Trp
>WENV170278035
CERQ01047287
276972
Gammaproteobacteria
CCA
Trp
>WENV170278025
CERQ01046291
276972
Gammaproteobacteria
CCA
Trp
>WENV170278559
CERQ01110831
276970
Gammaproteobacteria
CCG
Arg
>WENV170278317
CERQ01078767
276372
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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