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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170290076
CERY01091393
218119
Alphaproteobacteria
>WENV170290115
CERY01104603
112839
Alphaproteobacteria
CAG
Leu
>WENV170289973
CERY01035301
274138
Alphaproteobacteria
CAT
Met
>WENV170289961
CERY01026124
452884
Alphaproteobacteria
CCA
Trp
>WENV170290062
CERY01087140
454512
Alphaproteobacteria
CCA
Trp
>WENV170290093
CERY01098971
274141
Alphaproteobacteria
CCT
Arg
>WENV170290037
CERY01074511
46070
Alphaproteobacteria
CGA
Ser
>WENV170289993
CERY01047832
454510
Alphaproteobacteria
CGT
Thr
>WENV170290085
CERY01095436
274142
Alphaproteobacteria
GAT
Ile
>WENV170289992
CERY01047832
780039
Alphaproteobacteria
GCA
Cys
>WENV170290006
CERY01055826
19999
Alphaproteobacteria
GCT
Ser
>WENV170290130
CERY01107961
455172
Alphaproteobacteria
GGC
Ala
>WENV170290155
CERY01111690
655363
Alphaproteobacteria
GGT
Thr
>WENV170290102
CERY01102022
273451
Alphaproteobacteria
GTG
His
>WENV170290025
CERY01066072
180561
Alphaproteobacteria
TAG
Leu
>WENV170289982
CERY01040505
655167
Alphaproteobacteria
TTC
Glu
>WENV170290111
CERY01104334
455289
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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