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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170293681
CESC01000782
274144
Alphaproteobacteria
GTG
His
>WENV170293727
CESC01004223
655359
Alphaproteobacteria
GAC
Val
>WENV170293829
CESC01012621
154064
Alphaproteobacteria
CAG
Leu
>WENV170293892
CESC01017137
655361
Alphaproteobacteria
GCC
Gly
>WENV170293918
CESC01019684
46070
Alphaproteobacteria
CGA
Ser
>WENV170293925
CESC01020716
273797
Alphaproteobacteria
GGG
Pro
>WENV170293956
CESC01024357
451742
Alphaproteobacteria
GGC
Ala
>WENV170293972
CESC01026226
180561
Alphaproteobacteria
TAG
Leu
>WENV170293978
CESC01026993
452884
Alphaproteobacteria
CCA
Trp
>WENV170294029
CESC01030871
274133
Alphaproteobacteria
ACG
Arg
>WENV170294039
CESC01031398
273803
Alphaproteobacteria
CCT
Arg
>WENV170294050
CESC01032407
653534
Alphaproteobacteria
GCC
Gly
>WENV170294051
CESC01032407
653534
Alphaproteobacteria
GCC
Gly
>WENV170294052
CESC01032407
218119
Alphaproteobacteria
>WENV170294065
CESC01033852
655361
Alphaproteobacteria
GCC
Gly
>WENV170294066
CESC01034117
274144
Alphaproteobacteria
GTG
His
>WENV170294070
CESC01034170
452917
Alphaproteobacteria
TAC
Val
>WENV170294069
CESC01034170
655166
Alphaproteobacteria
CAC
Val
>WENV170294074
CESC01034581
455172
Alphaproteobacteria
GGC
Ala
>WENV170294078
CESC01034801
218137
Alphaproteobacteria
TAG
Leu
>WENV170294100
CESC01036736
455360
Alphaproteobacteria
CGC
Ala
>WENV170294132
CESC01040324
655171
Alphaproteobacteria
GGT
Thr
>WENV170294135
CESC01040821
655365
Alphaproteobacteria
TTC
Glu
>WENV170294206
CESC01048262
270796
Alphaproteobacteria
GTC
Asp
>WENV170294255
CESC01054578
780326
Alphaproteobacteria
CCC
Gly
>WENV170294265
CESC01055326
154065
Alphaproteobacteria
GAG
Leu
>WENV170294309
CESC01060338
455172
Alphaproteobacteria
GGC
Ala
>WENV170294415
CESC01072451
112839
Alphaproteobacteria
CAG
Leu
>WENV170294550
CESC01089287
655363
Alphaproteobacteria
GGT
Thr
>WENV170294584
CESC01092974
455289
Alphaproteobacteria
TTT
Lys
>WENV170294613
CESC01094297
655358
Alphaproteobacteria
TTG
Gln
>WENV170294662
CESC01115824
274131
Alphaproteobacteria
CAT
Met
>WENV170294692
CESC01131873
274130
Alphaproteobacteria
CGG
Pro
>WENV170294759
CESC01153239
653532
Alphaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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