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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170298383
CESF01107198
273758
Gammaproteobacteria
GAC
Val
>WENV170298384
CESF01107198
273758
Gammaproteobacteria
GAC
Val
>WENV170297804
CESF01007915
454866
Gammaproteobacteria
TAC
Val
>WENV170297765
CESF01003014
779604
Gammaproteobacteria
GCA
Cys
>WENV170298693
CESF01202459
452415
Gammaproteobacteria
GTG
His
>WENV170298061
CESF01042321
46027
Gammaproteobacteria
GGA
Ser
>WENV170298046
CESF01040477
274150
Gammaproteobacteria
CAT
Met
>WENV170298190
CESF01064848
653834
Gammaproteobacteria
TCC
Gly
>WENV170297855
CESF01015179
467367
Gammaproteobacteria
GGT
Thr
>WENV170298044
CESF01040416
273752
Gammaproteobacteria
CAT
Met
>WENV170297751
CESF01000534
456247
Gammaproteobacteria
CCA
Trp
>WENV170298367
CESF01102260
291486
Gammaproteobacteria
CCG
Arg
>WENV170297775
CESF01004413
274986
Gammaproteobacteria
CAT
Met
>WENV170298033
CESF01038293
30865
Gammaproteobacteria
GCT
Ser
>WENV170298318
CESF01089500
655146
Gammaproteobacteria
CCG
Arg
>WENV170298220
CESF01071452
275002
Gammaproteobacteria
ACG
Arg
>WENV170298719
CESF01223951
271458
Gammaproteobacteria
GGG
Pro
>WENV170298405
CESF01111831
271254
Gammaproteobacteria
CAT
Met
>WENV170298538
CESF01135227
273749
Gammaproteobacteria
CCA
Trp
>WENV170298506
CESF01130625
464809
Gammaproteobacteria
GAA
Phe
>WENV170297821
CESF01011562
276973
Gammaproteobacteria
GAC
Val
>WENV170297793
CESF01006871
282333
Gammaproteobacteria
GAC
Val
>WENV170298331
CESF01093061
273694
Gammaproteobacteria
GAC
Val
>WENV170298396
CESF01109690
780642
Gammaproteobacteria
GCA
Cys
>WENV170298240
CESF01075649
46215
Gammaproteobacteria
GCT
Ser
>WENV170298410
CESF01113594
452412
Gammaproteobacteria
GCC
Gly
>WENV170297757
CESF01002008
452412
Gammaproteobacteria
GCC
Gly
>WENV170297764
CESF01003014
452412
Gammaproteobacteria
GCC
Gly
>WENV170298742
CESF01235643
116386
Gammaproteobacteria
CAA
Leu
>WENV170298139
CESF01053935
275658
Gammaproteobacteria
TGG
Pro
>WENV170297803
CESF01007915
454864
Gammaproteobacteria
TAC
Val
>WENV170298555
CESF01136772
271200
Gammaproteobacteria
CAT
Met
>WENV170298241
CESF01075649
271456
Gammaproteobacteria
ACG
Arg
>WENV170297831
CESF01012893
459752
Gammaproteobacteria
TTC
Glu
>WENV170298450
CESF01119988
113485
Gammaproteobacteria
CAA
Leu
>WENV170297953
CESF01027395
780764
Gammaproteobacteria
TCC
Gly
>WENV170298472
CESF01123980
112371
Gammaproteobacteria
CAA
Leu
>WENV170297860
CESF01015689
276972
Gammaproteobacteria
CCA
Trp
>WENV170298262
CESF01080468
276972
Gammaproteobacteria
CCA
Trp
>WENV170298191
CESF01064848
452405
Gammaproteobacteria
GGT
Thr
>WENV170298850
CESF01302332
452414
Gammaproteobacteria
TTC
Glu
>WENV170298421
CESF01116465
291494
Gammaproteobacteria
TGG
Pro
>WENV170297774
CESF01004276
456267
Gammaproteobacteria
GAA
Phe
>WENV170297885
CESF01019263
454860
Gammaproteobacteria
TGT
Thr
>WENV170298514
CESF01132214
273328
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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