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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170301136
CESH01006597
779604
Gammaproteobacteria
GCA
Cys
>WENV170302863
CESH01215946
655112
Gammaproteobacteria
TCC
Gly
>WENV170302375
CESH01143127
452415
Gammaproteobacteria
GTG
His
>WENV170303768
CESH01488172
46027
Gammaproteobacteria
GGA
Ser
>WENV170302072
CESH01100963
284350
Gammaproteobacteria
TCT
Arg
>WENV170301699
CESH01059931
270982
Gammaproteobacteria
GAT
Ile
>WENV170302716
CESH01193192
272023
Gammaproteobacteria
GAT
Ile
>WENV170301308
CESH01023735
467367
Gammaproteobacteria
GGT
Thr
>WENV170303730
CESH01465389
273752
Gammaproteobacteria
CAT
Met
>WENV170301186
CESH01010563
451780
Gammaproteobacteria
GCC
Gly
>WENV170301830
CESH01074602
30865
Gammaproteobacteria
GCT
Ser
>WENV170301253
CESH01018217
276971
Gammaproteobacteria
ACG
Arg
>WENV170301237
CESH01015500
451784
Gammaproteobacteria
GAA
Phe
>WENV170301633
CESH01054161
218019
Gammaproteobacteria
GAG
Leu
>WENV170303726
CESH01463792
86896
Gammaproteobacteria
GGA
Ser
>WENV170302533
CESH01165426
271458
Gammaproteobacteria
GGG
Pro
>WENV170301635
CESH01054244
452416
Gammaproteobacteria
TTT
Lys
>WENV170301636
CESH01054244
452416
Gammaproteobacteria
TTT
Lys
>WENV170301872
CESH01078784
452416
Gammaproteobacteria
TTT
Lys
>WENV170301701
CESH01060208
464809
Gammaproteobacteria
GAA
Phe
>WENV170303282
CESH01282323
464809
Gammaproteobacteria
GAA
Phe
>WENV170302374
CESH01143127
275462
Gammaproteobacteria
TCT
Arg
>WENV170302839
CESH01213092
273698
Gammaproteobacteria
CCG
Arg
>WENV170303032
CESH01247575
30510
Gammaproteobacteria
GGA
Ser
>WENV170302935
CESH01229904
180467
Gammaproteobacteria
CAA
Leu
>WENV170302515
CESH01163067
452412
Gammaproteobacteria
GCC
Gly
>WENV170301298
CESH01023044
452412
Gammaproteobacteria
GCC
Gly
>WENV170301278
CESH01020352
452412
Gammaproteobacteria
GCC
Gly
>WENV170301221
CESH01014370
452412
Gammaproteobacteria
GCC
Gly
>WENV170301135
CESH01006597
452412
Gammaproteobacteria
GCC
Gly
>WENV170301236
CESH01015439
30516
Gammaproteobacteria
TGA
Ser
>WENV170301746
CESH01065750
30516
Gammaproteobacteria
TGA
Ser
>WENV170303429
CESH01291907
271460
Gammaproteobacteria
CGG
Pro
>WENV170303248
CESH01279989
271460
Gammaproteobacteria
CGG
Pro
>WENV170302626
CESH01178636
273753
Gammaproteobacteria
ACG
Arg
>WENV170301818
CESH01073376
275549
Gammaproteobacteria
CAT
Met
>WENV170301281
CESH01020880
271459
Gammaproteobacteria
CCT
Arg
>WENV170302503
CESH01161362
781121
Gammaproteobacteria
GCA
Cys
>WENV170302269
CESH01126566
271200
Gammaproteobacteria
CAT
Met
>WENV170301485
CESH01040424
271200
Gammaproteobacteria
CAT
Met
>WENV170303120
CESH01262195
273327
Gammaproteobacteria
ACG
Arg
>WENV170301809
CESH01071806
112665
Gammaproteobacteria
TAA
Leu
>WENV170302522
CESH01163862
459731
Gammaproteobacteria
GGT
Thr
>WENV170302370
CESH01141233
459731
Gammaproteobacteria
GGT
Thr
>WENV170301150
CESH01007726
452604
Gammaproteobacteria
TTC
Glu
>WENV170301119
CESH01005851
455425
Gammaproteobacteria
GCC
Gly
>WENV170301584
CESH01049612
452881
Gammaproteobacteria
TGT
Thr
>WENV170302038
CESH01097498
273699
Gammaproteobacteria
CAT
Met
>WENV170303532
CESH01323440
452603
Gammaproteobacteria
CCA
Trp
>WENV170301285
CESH01021609
270822
Gammaproteobacteria
CCA
Trp
>WENV170302936
CESH01230190
452414
Gammaproteobacteria
TTC
Glu
>WENV170302037
CESH01097404
276970
Gammaproteobacteria
CCG
Arg
>WENV170301389
CESH01031243
182178
Gammaproteobacteria
CAA
Leu
>WENV170301724
CESH01063978
454091
Gammaproteobacteria
GGC
Ala
>WENV170301252
CESH01018217
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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