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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170303885
CESI01001069
273797
Alphaproteobacteria
GGG
Pro
>WENV170303932
CESI01003922
273797
Alphaproteobacteria
GGG
Pro
>WENV170304203
CESI01026515
452917
Alphaproteobacteria
TAC
Val
>WENV170304566
CESI01055943
452917
Alphaproteobacteria
TAC
Val
>WENV170304700
CESI01070346
452884
Alphaproteobacteria
CCA
Trp
>WENV170304006
CESI01011122
656001
Alphaproteobacteria
GCC
Gly
>WENV170304177
CESI01024438
656001
Alphaproteobacteria
GCC
Gly
>WENV170304178
CESI01024438
218119
Alphaproteobacteria
>WENV170304373
CESI01038578
218119
Alphaproteobacteria
>WENV170304694
CESI01069593
218119
Alphaproteobacteria
>WENV170304856
CESI01084706
218119
Alphaproteobacteria
>WENV170304423
CESI01043273
277700
Alphaproteobacteria
GTG
His
>WENV170304363
CESI01037804
653532
Alphaproteobacteria
GTT
Asn
>WENV170304088
CESI01017401
180720
Alphaproteobacteria
TAG
Leu
>WENV170304628
CESI01063097
275155
Alphaproteobacteria
GGG
Pro
>WENV170304380
CESI01039030
275157
Alphaproteobacteria
TGG
Pro
>WENV170305063
CESI01108218
275157
Alphaproteobacteria
TGG
Pro
>WENV170305401
CESI01143016
275157
Alphaproteobacteria
TGG
Pro
>WENV170304505
CESI01050106
275560
Alphaproteobacteria
ACG
Arg
>WENV170305281
CESI01132826
780582
Alphaproteobacteria
TCC
Gly
>WENV170305003
CESI01101067
780582
Alphaproteobacteria
TCC
Gly
>WENV170303911
CESI01003042
274225
Alphaproteobacteria
CAT
Met
>WENV170305404
CESI01143102
658005
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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