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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170307826
CESK01013055
457453
Gammaproteobacteria
TTT
Lys
>WENV170307748
CESK01002858
273863
Gammaproteobacteria
GGG
Pro
>WENV170307763
CESK01004740
454971
Gammaproteobacteria
TTT
Lys
>WENV170307790
CESK01008054
780242
Gammaproteobacteria
GCA
Cys
>WENV170307987
CESK01040976
451982
Gammaproteobacteria
GGC
Ala
>WENV170307776
CESK01006471
276185
Gammaproteobacteria
TGG
Pro
>WENV170307909
CESK01025189
180499
Gammaproteobacteria
GTA
Tyr
>WENV170307774
CESK01006439
112815
Gammaproteobacteria
CAG
Leu
>WENV170307830
CESK01013473
273869
Gammaproteobacteria
GTT
Asn
>WENV170308073
CESK01072468
453897
Gammaproteobacteria
TAC
Val
>WENV170307791
CESK01008054
112817
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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