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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170312277
CESM01230621
452884
Alphaproteobacteria
CCA
Trp
>WENV170310641
CESM01057024
218119
Alphaproteobacteria
>WENV170311200
CESM01115700
451759
Alphaproteobacteria
TTT
Lys
>WENV170310823
CESM01075417
454059
Alphaproteobacteria
TTT
Lys
>WENV170310888
CESM01082020
454059
Alphaproteobacteria
TTT
Lys
>WENV170310909
CESM01084039
454059
Alphaproteobacteria
TTT
Lys
>WENV170312560
CESM01315710
275157
Alphaproteobacteria
TGG
Pro
>WENV170310203
CESM01020527
273603
Alphaproteobacteria
TGG
Pro
>WENV170310868
CESM01079918
655271
Alphaproteobacteria
GGT
Thr
>WENV170310201
CESM01020300
780582
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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