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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170318064
CESQ01011071
275457
Gammaproteobacteria
ACG
Arg
>WENV170318934
CESQ01095614
275457
Gammaproteobacteria
ACG
Arg
>WENV170317989
CESQ01006568
276971
Gammaproteobacteria
ACG
Arg
>WENV170319403
CESQ01151148
113485
Gammaproteobacteria
CAA
Leu
>WENV170318651
CESQ01067103
113485
Gammaproteobacteria
CAA
Leu
>WENV170319577
CESQ01177486
112371
Gammaproteobacteria
CAA
Leu
>WENV170320510
CESQ01423919
474520
Gammaproteobacteria
CCA
Trp
>WENV170318309
CESQ01030703
276972
Gammaproteobacteria
CCA
Trp
>WENV170318584
CESQ01059844
276972
Gammaproteobacteria
CCA
Trp
>WENV170318975
CESQ01101735
276972
Gammaproteobacteria
CCA
Trp
>WENV170319329
CESQ01141623
276972
Gammaproteobacteria
CCA
Trp
>WENV170319540
CESQ01170769
276972
Gammaproteobacteria
CCA
Trp
>WENV170318416
CESQ01041472
278982
Gammaproteobacteria
CCG
Arg
>WENV170317963
CESQ01003805
278982
Gammaproteobacteria
CCG
Arg
>WENV170320479
CESQ01411661
276970
Gammaproteobacteria
CCG
Arg
>WENV170320320
CESQ01317292
273847
Gammaproteobacteria
CCT
Arg
>WENV170318620
CESQ01063082
271460
Gammaproteobacteria
CGG
Pro
>WENV170320417
CESQ01385542
273859
Gammaproteobacteria
CGG
Pro
>WENV170318605
CESQ01060948
464809
Gammaproteobacteria
GAA
Phe
>WENV170319543
CESQ01171394
464809
Gammaproteobacteria
GAA
Phe
>WENV170319950
CESQ01215563
452407
Gammaproteobacteria
GAA
Phe
>WENV170320018
CESQ01220554
276973
Gammaproteobacteria
GAC
Val
>WENV170319476
CESQ01161676
276973
Gammaproteobacteria
GAC
Val
>WENV170317951
CESQ01002772
452412
Gammaproteobacteria
GCC
Gly
>WENV170318825
CESQ01083341
30353
Gammaproteobacteria
GGA
Ser
>WENV170318950
CESQ01098799
30792
Gammaproteobacteria
GGA
Ser
>WENV170318331
CESQ01033345
30792
Gammaproteobacteria
GGA
Ser
>WENV170318404
CESQ01039836
456510
Gammaproteobacteria
GGC
Ala
>WENV170319619
CESQ01182563
276974
Gammaproteobacteria
GGG
Pro
>WENV170318623
CESQ01063167
276974
Gammaproteobacteria
GGG
Pro
>WENV170318768
CESQ01077456
276974
Gammaproteobacteria
GGG
Pro
>WENV170320036
CESQ01221784
271458
Gammaproteobacteria
GGG
Pro
>WENV170318339
CESQ01034136
455405
Gammaproteobacteria
GGT
Thr
>WENV170318000
CESQ01007566
271613
Gammaproteobacteria
GTC
Asp
>WENV170318168
CESQ01019497
273852
Gammaproteobacteria
GTC
Asp
>WENV170319549
CESQ01172460
274093
Gammaproteobacteria
GTC
Asp
>WENV170318672
CESQ01069447
452415
Gammaproteobacteria
GTG
His
>WENV170318167
CESQ01019497
454968
Gammaproteobacteria
TAC
Val
>WENV170318818
CESQ01082537
273858
Gammaproteobacteria
TCT
Arg
>WENV170319965
CESQ01216757
655197
Gammaproteobacteria
TTG
Gln
>WENV170319538
CESQ01170607
457453
Gammaproteobacteria
TTT
Lys
>WENV170319674
CESQ01189211
457453
Gammaproteobacteria
TTT
Lys
>WENV170318334
CESQ01034025
452416
Gammaproteobacteria
TTT
Lys
>WENV170318335
CESQ01034025
452416
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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