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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170366005
CETO01022787
655167
Alphaproteobacteria
TTC
Glu
>WENV170366875
CETO01143011
46086
Alphaproteobacteria
CGA
Ser
>WENV170366879
CETO01145318
452884
Alphaproteobacteria
CCA
Trp
>WENV170365814
CETO01004269
112803
Alphaproteobacteria
CAG
Leu
>WENV170366443
CETO01067182
780331
Alphaproteobacteria
TCC
Gly
>WENV170366516
CETO01072421
780331
Alphaproteobacteria
TCC
Gly
>WENV170366851
CETO01136679
655171
Alphaproteobacteria
GGT
Thr
>WENV170366259
CETO01047536
277664
Alphaproteobacteria
GTC
Asp
>WENV170366319
CETO01055375
274224
Alphaproteobacteria
CAT
Met
>WENV170366069
CETO01029824
274224
Alphaproteobacteria
CAT
Met
>WENV170366931
CETO01156474
655359
Alphaproteobacteria
GAC
Val
>WENV170366505
CETO01071537
154065
Alphaproteobacteria
GAG
Leu
>WENV170366012
CETO01023145
655363
Alphaproteobacteria
GGT
Thr
>WENV170366178
CETO01039597
274144
Alphaproteobacteria
GTG
His
>WENV170365932
CETO01014904
455172
Alphaproteobacteria
GGC
Ala
>WENV170366684
CETO01086864
273450
Alphaproteobacteria
TCT
Arg
>WENV170366680
CETO01086596
47329
Alphaproteobacteria
TGA
Ser
>WENV170366292
CETO01051485
454512
Alphaproteobacteria
CCA
Trp
>WENV170366649
CETO01084871
655361
Alphaproteobacteria
GCC
Gly
>WENV170366503
CETO01071425
655361
Alphaproteobacteria
GCC
Gly
>WENV170365789
CETO01002167
655361
Alphaproteobacteria
GCC
Gly
>WENV170366662
CETO01085574
274141
Alphaproteobacteria
CCT
Arg
>WENV170366587
CETO01079296
274133
Alphaproteobacteria
ACG
Arg
>WENV170366857
CETO01139424
218137
Alphaproteobacteria
TAG
Leu
>WENV170366609
CETO01081144
780582
Alphaproteobacteria
TCC
Gly
>WENV170366278
CETO01049010
112839
Alphaproteobacteria
CAG
Leu
>WENV170366112
CETO01034056
112839
Alphaproteobacteria
CAG
Leu
>WENV170366814
CETO01118647
301299
Alphaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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