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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170365856
CETO01008833
275457
Gammaproteobacteria
ACG
Arg
>WENV170365857
CETO01008833
275457
Gammaproteobacteria
ACG
Arg
>WENV170366352
CETO01058975
273854
Gammaproteobacteria
CAT
Met
>WENV170365873
CETO01009780
779604
Gammaproteobacteria
GCA
Cys
>WENV170365787
CETO01002164
270982
Gammaproteobacteria
GAT
Ile
>WENV170365881
CETO01010538
270982
Gammaproteobacteria
GAT
Ile
>WENV170366055
CETO01028020
653834
Gammaproteobacteria
TCC
Gly
>WENV170366051
CETO01027997
467367
Gammaproteobacteria
GGT
Thr
>WENV170366035
CETO01025691
273870
Gammaproteobacteria
ACG
Arg
>WENV170365794
CETO01003199
456706
Gammaproteobacteria
TGT
Thr
>WENV170366977
CETO01165782
276974
Gammaproteobacteria
GGG
Pro
>WENV170366666
CETO01086128
454967
Gammaproteobacteria
TTT
Lys
>WENV170366811
CETO01117443
463262
Gammaproteobacteria
TTT
Lys
>WENV170367051
CETO01174323
45684
Gammaproteobacteria
GCT
Ser
>WENV170366683
CETO01086765
451982
Gammaproteobacteria
GGC
Ala
>WENV170367010
CETO01169884
270689
Gammaproteobacteria
TCG
Arg
>WENV170366730
CETO01088613
271458
Gammaproteobacteria
GGG
Pro
>WENV170365920
CETO01013568
452416
Gammaproteobacteria
TTT
Lys
>WENV170365921
CETO01013568
452416
Gammaproteobacteria
TTT
Lys
>WENV170366644
CETO01084807
271254
Gammaproteobacteria
CAT
Met
>WENV170365896
CETO01011922
273847
Gammaproteobacteria
CCT
Arg
>WENV170366234
CETO01044414
273857
Gammaproteobacteria
TGG
Pro
>WENV170366710
CETO01088156
464809
Gammaproteobacteria
GAA
Phe
>WENV170365936
CETO01015292
276973
Gammaproteobacteria
GAC
Val
>WENV170366312
CETO01054470
780642
Gammaproteobacteria
GCA
Cys
>WENV170366070
CETO01029954
452332
Gammaproteobacteria
GTG
His
>WENV170366896
CETO01148657
114536
Gammaproteobacteria
CAA
Leu
>WENV170366305
CETO01053587
655197
Gammaproteobacteria
TTG
Gln
>WENV170366155
CETO01038285
278982
Gammaproteobacteria
CCG
Arg
>WENV170366897
CETO01148797
87214
Gammaproteobacteria
GGA
Ser
>WENV170365872
CETO01009780
452412
Gammaproteobacteria
GCC
Gly
>WENV170366687
CETO01087317
452412
Gammaproteobacteria
GCC
Gly
>WENV170366699
CETO01087798
452412
Gammaproteobacteria
GCC
Gly
>WENV170366270
CETO01048342
218101
Gammaproteobacteria
GTA
Tyr
>WENV170366884
CETO01146331
30520
Gammaproteobacteria
TGA
Ser
>WENV170366640
CETO01084279
481346
Gammaproteobacteria
GTT
Asn
>WENV170366729
CETO01088605
271460
Gammaproteobacteria
CGG
Pro
>WENV170366280
CETO01049710
456510
Gammaproteobacteria
GGC
Ala
>WENV170366053
CETO01028020
452404
Gammaproteobacteria
TGT
Thr
>WENV170365774
CETO01000486
273724
Gammaproteobacteria
TCT
Arg
>WENV170366235
CETO01044414
273858
Gammaproteobacteria
TCT
Arg
>WENV170365909
CETO01012792
273859
Gammaproteobacteria
CGG
Pro
>WENV170366271
CETO01048342
780101
Gammaproteobacteria
TCC
Gly
>WENV170366717
CETO01088334
273719
Gammaproteobacteria
CAT
Met
>WENV170366678
CETO01086538
271200
Gammaproteobacteria
CAT
Met
>WENV170366036
CETO01025716
113485
Gammaproteobacteria
CAA
Leu
>WENV170366484
CETO01068803
452881
Gammaproteobacteria
TGT
Thr
>WENV170366160
CETO01038709
454969
Gammaproteobacteria
GTT
Asn
>WENV170366716
CETO01088272
271613
Gammaproteobacteria
GTC
Asp
>WENV170366969
CETO01163949
270692
Gammaproteobacteria
CAT
Met
>WENV170366670
CETO01086292
276972
Gammaproteobacteria
CCA
Trp
>WENV170366675
CETO01086459
780215
Gammaproteobacteria
GCA
Cys
>WENV170366056
CETO01028020
452405
Gammaproteobacteria
GGT
Thr
>WENV170365876
CETO01010221
276970
Gammaproteobacteria
CCG
Arg
>WENV170366054
CETO01028020
218035
Gammaproteobacteria
GTA
Tyr
>WENV170366272
CETO01048342
655194
Gammaproteobacteria
GGT
Thr
>WENV170365769
CETO01000459
454964
Gammaproteobacteria
TTC
Glu
>WENV170366563
CETO01076566
30792
Gammaproteobacteria
GGA
Ser
>WENV170366713
CETO01088261
30792
Gammaproteobacteria
GGA
Ser
>WENV170367042
CETO01173936
180477
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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