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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170368977
CETQ01133882
656944
Gammaproteobacteria
CCT
Arg
>WENV170368163
CETQ01019437
272023
Gammaproteobacteria
GAT
Ile
>WENV170369042
CETQ01136774
456247
Gammaproteobacteria
CCA
Trp
>WENV170368743
CETQ01100896
458351
Gammaproteobacteria
TTG
Gln
>WENV170368288
CETQ01035704
30865
Gammaproteobacteria
GCT
Ser
>WENV170368044
CETQ01007336
276971
Gammaproteobacteria
ACG
Arg
>WENV170368045
CETQ01007336
276971
Gammaproteobacteria
ACG
Arg
>WENV170368184
CETQ01022128
271287
Gammaproteobacteria
CAT
Met
>WENV170368748
CETQ01101866
278982
Gammaproteobacteria
CCG
Arg
>WENV170368150
CETQ01018299
452412
Gammaproteobacteria
GCC
Gly
>WENV170368161
CETQ01019166
452412
Gammaproteobacteria
GCC
Gly
>WENV170369058
CETQ01137125
452412
Gammaproteobacteria
GCC
Gly
>WENV170368305
CETQ01038377
113737
Gammaproteobacteria
CAA
Leu
>WENV170368452
CETQ01059179
781121
Gammaproteobacteria
GCA
Cys
>WENV170368533
CETQ01070249
452881
Gammaproteobacteria
TGT
Thr
>WENV170368907
CETQ01127036
452881
Gammaproteobacteria
TGT
Thr
>WENV170368285
CETQ01035450
276972
Gammaproteobacteria
CCA
Trp
>WENV170368934
CETQ01129139
276972
Gammaproteobacteria
CCA
Trp
>WENV170369150
CETQ01202303
455237
Gammaproteobacteria
TGT
Thr
>WENV170367995
CETQ01002119
276970
Gammaproteobacteria
CCG
Arg
>WENV170368043
CETQ01007336
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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