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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170371817
CETS01041696
455289
Alphaproteobacteria
TTT
Lys
>WENV170371892
CETS01047927
455289
Alphaproteobacteria
TTT
Lys
>WENV170372930
CETS01148676
456497
Alphaproteobacteria
TGT
Thr
>WENV170373189
CETS01196613
452629
Alphaproteobacteria
GAA
Phe
>WENV170372950
CETS01149860
270887
Alphaproteobacteria
TGG
Pro
>WENV170371508
CETS01016344
780331
Alphaproteobacteria
TCC
Gly
>WENV170372390
CETS01091136
780331
Alphaproteobacteria
TCC
Gly
>WENV170372387
CETS01090872
780260
Alphaproteobacteria
GCA
Cys
>WENV170371729
CETS01033866
180423
Alphaproteobacteria
CAA
Leu
>WENV170371631
CETS01026608
655270
Alphaproteobacteria
GAA
Phe
>WENV170372092
CETS01063561
218119
Alphaproteobacteria
>WENV170371363
CETS01005938
659897
Alphaproteobacteria
GAC
Val
>WENV170371879
CETS01046868
277664
Alphaproteobacteria
GTC
Asp
>WENV170371842
CETS01044155
281026
Alphaproteobacteria
CAT
Met
>WENV170372198
CETS01071503
451755
Alphaproteobacteria
TGC
Ala
>WENV170371934
CETS01051058
277700
Alphaproteobacteria
GTG
His
>WENV170373370
CETS01266566
655849
Alphaproteobacteria
TTG
Gln
>WENV170372069
CETS01062253
274224
Alphaproteobacteria
CAT
Met
>WENV170372048
CETS01060440
451742
Alphaproteobacteria
GGC
Ala
>WENV170372346
CETS01086711
653581
Alphaproteobacteria
GCC
Gly
>WENV170371831
CETS01042931
19999
Alphaproteobacteria
GCT
Ser
>WENV170372315
CETS01083250
655363
Alphaproteobacteria
GGT
Thr
>WENV170372607
CETS01114826
655363
Alphaproteobacteria
GGT
Thr
>WENV170371706
CETS01032127
274144
Alphaproteobacteria
GTG
His
>WENV170371997
CETS01056200
455172
Alphaproteobacteria
GGC
Ala
>WENV170371832
CETS01042989
455172
Alphaproteobacteria
GGC
Ala
>WENV170371765
CETS01037976
455172
Alphaproteobacteria
GGC
Ala
>WENV170371699
CETS01031332
455172
Alphaproteobacteria
GGC
Ala
>WENV170371721
CETS01033191
274138
Alphaproteobacteria
CAT
Met
>WENV170373404
CETS01275895
453993
Alphaproteobacteria
GAA
Phe
>WENV170372593
CETS01113807
451850
Alphaproteobacteria
TAC
Val
>WENV170371852
CETS01044891
455026
Alphaproteobacteria
TTC
Glu
>WENV170372703
CETS01125927
454512
Alphaproteobacteria
CCA
Trp
>WENV170372414
CETS01093356
454512
Alphaproteobacteria
CCA
Trp
>WENV170371904
CETS01048880
454512
Alphaproteobacteria
CCA
Trp
>WENV170371615
CETS01024772
46044
Alphaproteobacteria
TGA
Ser
>WENV170372918
CETS01147481
455360
Alphaproteobacteria
CGC
Ala
>WENV170372634
CETS01117720
455360
Alphaproteobacteria
CGC
Ala
>WENV170372143
CETS01068008
455360
Alphaproteobacteria
CGC
Ala
>WENV170371534
CETS01018238
455360
Alphaproteobacteria
CGC
Ala
>WENV170371950
CETS01051878
275204
Alphaproteobacteria
ACG
Arg
>WENV170371422
CETS01010590
655361
Alphaproteobacteria
GCC
Gly
>WENV170372610
CETS01115107
655361
Alphaproteobacteria
GCC
Gly
>WENV170372237
CETS01074971
274141
Alphaproteobacteria
CCT
Arg
>WENV170372094
CETS01063775
780346
Alphaproteobacteria
CTG
Gln
>WENV170371844
CETS01044203
780346
Alphaproteobacteria
CTG
Gln
>WENV170372195
CETS01071344
780346
Alphaproteobacteria
CTG
Gln
>WENV170373249
CETS01224629
454504
Alphaproteobacteria
CAT
Met
>WENV170371365
CETS01006095
656140
Alphaproteobacteria
GAC
Val
>WENV170372920
CETS01147684
656140
Alphaproteobacteria
GAC
Val
>WENV170372062
CETS01061392
20317
Alphaproteobacteria
GCT
Ser
>WENV170372403
CETS01092114
663828
Alphaproteobacteria
TTC
Glu
>WENV170372402
CETS01092114
663828
Alphaproteobacteria
TTC
Glu
>WENV170372744
CETS01130204
461047
Alphaproteobacteria
CCA
Trp
>WENV170371707
CETS01032147
780582
Alphaproteobacteria
TCC
Gly
>WENV170372286
CETS01080010
281027
Alphaproteobacteria
CCT
Arg
>WENV170372259
CETS01078303
112839
Alphaproteobacteria
CAG
Leu
>WENV170372264
CETS01078994
320024
Alphaproteobacteria
CCT
Arg
>WENV170371498
CETS01015738
780039
Alphaproteobacteria
GCA
Cys
>WENV170372781
CETS01133373
780039
Alphaproteobacteria
GCA
Cys
>WENV170371572
CETS01021475
270777
Alphaproteobacteria
CAT
Met
>WENV170372257
CETS01077704
454433
Alphaproteobacteria
TGT
Thr
>WENV170371419
CETS01010576
454433
Alphaproteobacteria
TGT
Thr
>WENV170373004
CETS01156523
654915
Alphaproteobacteria
GCC
Gly
>WENV170371602
CETS01023643
301299
Alphaproteobacteria
CCG
Arg
>WENV170371744
CETS01035242
180561
Alphaproteobacteria
TAG
Leu
>WENV170373098
CETS01161467
654995
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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