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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170375088
CETT01164198
273854
Gammaproteobacteria
CAT
Met
>WENV170374735
CETT01122629
271464
Gammaproteobacteria
TGG
Pro
>WENV170373623
CETT01005991
272023
Gammaproteobacteria
GAT
Ile
>WENV170374612
CETT01107734
456706
Gammaproteobacteria
TGT
Thr
>WENV170374505
CETT01094777
457171
Gammaproteobacteria
GTT
Asn
>WENV170374448
CETT01087834
655197
Gammaproteobacteria
TTG
Gln
>WENV170375382
CETT01281822
278982
Gammaproteobacteria
CCG
Arg
>WENV170374914
CETT01141911
452412
Gammaproteobacteria
GCC
Gly
>WENV170373733
CETT01015388
275934
Gammaproteobacteria
GGG
Pro
>WENV170374823
CETT01133081
452881
Gammaproteobacteria
TGT
Thr
>WENV170374957
CETT01145883
271613
Gammaproteobacteria
GTC
Asp
>WENV170373825
CETT01024165
276972
Gammaproteobacteria
CCA
Trp
>WENV170374350
CETT01077708
466510
Gammaproteobacteria
GCC
Gly
>WENV170374516
CETT01095749
459406
Gammaproteobacteria
TAC
Val
>WENV170373554
CETT01003274
466186
Gammaproteobacteria
TGC
Ala
>WENV170373547
CETT01002658
276372
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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