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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170377354
CETU01153646
180489
Alphaproteobacteria
TAG
Leu
>WENV170377471
CETU01161427
455289
Alphaproteobacteria
TTT
Lys
>WENV170375712
CETU01012907
451755
Alphaproteobacteria
TGC
Ala
>WENV170377512
CETU01163274
277700
Alphaproteobacteria
GTG
His
>WENV170377160
CETU01135887
274224
Alphaproteobacteria
CAT
Met
>WENV170375606
CETU01006063
19999
Alphaproteobacteria
GCT
Ser
>WENV170377117
CETU01131609
455172
Alphaproteobacteria
GGC
Ala
>WENV170377419
CETU01157914
273450
Alphaproteobacteria
TCT
Arg
>WENV170377077
CETU01127946
454059
Alphaproteobacteria
TTT
Lys
>WENV170375818
CETU01019848
454059
Alphaproteobacteria
TTT
Lys
>WENV170376636
CETU01084285
274138
Alphaproteobacteria
CAT
Met
>WENV170376054
CETU01036257
454512
Alphaproteobacteria
CCA
Trp
>WENV170377009
CETU01121840
455360
Alphaproteobacteria
CGC
Ala
>WENV170376938
CETU01114184
270796
Alphaproteobacteria
GTC
Asp
>WENV170376604
CETU01081991
655361
Alphaproteobacteria
GCC
Gly
>WENV170375619
CETU01006698
780346
Alphaproteobacteria
CTG
Gln
>WENV170377205
CETU01141624
656140
Alphaproteobacteria
GAC
Val
>WENV170377902
CETU01282008
112839
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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