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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170378290
CETV01009472
655365
Alphaproteobacteria
TTC
Glu
>WENV170378291
CETV01009472
655365
Alphaproteobacteria
TTC
Glu
>WENV170378497
CETV01025719
270777
Alphaproteobacteria
CAT
Met
>WENV170378843
CETV01055567
180423
Alphaproteobacteria
CAA
Leu
>WENV170378863
CETV01058890
454512
Alphaproteobacteria
CCA
Trp
>WENV170379044
CETV01083624
112429
Alphaproteobacteria
GAG
Leu
>WENV170379183
CETV01100992
457159
Alphaproteobacteria
CGC
Ala
>WENV170379193
CETV01101446
455172
Alphaproteobacteria
GGC
Ala
>WENV170379312
CETV01115874
655363
Alphaproteobacteria
GGT
Thr
>WENV170379490
CETV01132788
451850
Alphaproteobacteria
TAC
Val
>WENV170379632
CETV01162619
274138
Alphaproteobacteria
CAT
Met
>WENV170379658
CETV01175248
273536
Alphaproteobacteria
GTG
His
>WENV170379700
CETV01192037
654960
Alphaproteobacteria
CTC
Glu
>WENV170379721
CETV01198357
452565
Alphaproteobacteria
GAA
Phe
>WENV170379741
CETV01203842
780039
Alphaproteobacteria
GCA
Cys
>WENV170379799
CETV01222444
655421
Alphaproteobacteria
GGT
Thr
>WENV170379873
CETV01243934
779636
Alphaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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