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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170382681
CETX01036883
457453
Gammaproteobacteria
TTT
Lys
>WENV170383047
CETX01069164
271464
Gammaproteobacteria
TGG
Pro
>WENV170382800
CETX01047621
270982
Gammaproteobacteria
GAT
Ile
>WENV170383016
CETX01066256
270982
Gammaproteobacteria
GAT
Ile
>WENV170382442
CETX01015993
272023
Gammaproteobacteria
GAT
Ile
>WENV170383696
CETX01137373
456706
Gammaproteobacteria
TGT
Thr
>WENV170383028
CETX01067881
454967
Gammaproteobacteria
TTT
Lys
>WENV170383887
CETX01152611
456273
Gammaproteobacteria
TTT
Lys
>WENV170383377
CETX01102214
451784
Gammaproteobacteria
GAA
Phe
>WENV170382513
CETX01023096
452416
Gammaproteobacteria
TTT
Lys
>WENV170382731
CETX01041230
459789
Gammaproteobacteria
GTT
Asn
>WENV170382730
CETX01041230
459789
Gammaproteobacteria
GTT
Asn
>WENV170384370
CETX01289400
452332
Gammaproteobacteria
GTG
His
>WENV170382721
CETX01039897
655197
Gammaproteobacteria
TTG
Gln
>WENV170382958
CETX01059885
278982
Gammaproteobacteria
CCG
Arg
>WENV170382202
CETX01002291
452412
Gammaproteobacteria
GCC
Gly
>WENV170383300
CETX01095671
452412
Gammaproteobacteria
GCC
Gly
>WENV170382986
CETX01063294
275934
Gammaproteobacteria
GGG
Pro
>WENV170383764
CETX01142770
780765
Gammaproteobacteria
CCC
Gly
>WENV170383330
CETX01097936
271459
Gammaproteobacteria
CCT
Arg
>WENV170383166
CETX01080674
271459
Gammaproteobacteria
CCT
Arg
>WENV170384318
CETX01277439
273869
Gammaproteobacteria
GTT
Asn
>WENV170383061
CETX01070075
451732
Gammaproteobacteria
GCC
Gly
>WENV170383152
CETX01079039
113485
Gammaproteobacteria
CAA
Leu
>WENV170383270
CETX01092326
452881
Gammaproteobacteria
TGT
Thr
>WENV170383494
CETX01117503
271613
Gammaproteobacteria
GTC
Asp
>WENV170383279
CETX01093144
276972
Gammaproteobacteria
CCA
Trp
>WENV170383194
CETX01083231
276972
Gammaproteobacteria
CCA
Trp
>WENV170382711
CETX01039212
452414
Gammaproteobacteria
TTC
Glu
>WENV170382227
CETX01003526
459406
Gammaproteobacteria
TAC
Val
>WENV170383009
CETX01065451
466186
Gammaproteobacteria
TGC
Ala
>WENV170382280
CETX01006084
30792
Gammaproteobacteria
GGA
Ser
>WENV170383129
CETX01077279
273328
Gammaproteobacteria
GAC
Val
>WENV170383251
CETX01090289
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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