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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170393188
CEUB01137963
271464
Gammaproteobacteria
TGG
Pro
>WENV170393608
CEUB01206217
474520
Gammaproteobacteria
CCA
Trp
>WENV170392969
CEUB01106900
270982
Gammaproteobacteria
GAT
Ile
>WENV170392973
CEUB01107219
270982
Gammaproteobacteria
GAT
Ile
>WENV170393374
CEUB01173699
502832
Gammaproteobacteria
GAA
Phe
>WENV170392539
CEUB01048235
458351
Gammaproteobacteria
TTG
Gln
>WENV170392226
CEUB01015937
276971
Gammaproteobacteria
ACG
Arg
>WENV170393568
CEUB01201576
457171
Gammaproteobacteria
GTT
Asn
>WENV170392415
CEUB01036169
274864
Gammaproteobacteria
ACG
Arg
>WENV170392835
CEUB01086649
278155
Gammaproteobacteria
TGG
Pro
>WENV170393212
CEUB01141782
452412
Gammaproteobacteria
GCC
Gly
>WENV170392544
CEUB01048775
113737
Gammaproteobacteria
CAA
Leu
>WENV170392222
CEUB01015802
781121
Gammaproteobacteria
GCA
Cys
>WENV170392847
CEUB01088489
454397
Gammaproteobacteria
TGT
Thr
>WENV170392211
CEUB01015374
466510
Gammaproteobacteria
GCC
Gly
>WENV170392981
CEUB01108159
276970
Gammaproteobacteria
CCG
Arg
>WENV170392800
CEUB01082210
30792
Gammaproteobacteria
GGA
Ser
>WENV170392225
CEUB01015937
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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