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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170414935
CEUL01006280
656944
Gammaproteobacteria
CCT
Arg
>WENV170416281
CEUL01114866
274166
Gammaproteobacteria
GAC
Val
>WENV170415573
CEUL01051075
270982
Gammaproteobacteria
GAT
Ile
>WENV170415878
CEUL01076305
270982
Gammaproteobacteria
GAT
Ile
>WENV170415312
CEUL01031390
276974
Gammaproteobacteria
GGG
Pro
>WENV170417006
CEUL01150138
502832
Gammaproteobacteria
GAA
Phe
>WENV170415275
CEUL01028610
458351
Gammaproteobacteria
TTG
Gln
>WENV170414917
CEUL01005223
276971
Gammaproteobacteria
ACG
Arg
>WENV170416716
CEUL01142601
457171
Gammaproteobacteria
GTT
Asn
>WENV170416315
CEUL01117211
274864
Gammaproteobacteria
ACG
Arg
>WENV170415080
CEUL01015216
271600
Gammaproteobacteria
GAT
Ile
>WENV170416296
CEUL01116101
278982
Gammaproteobacteria
CCG
Arg
>WENV170416361
CEUL01120639
456510
Gammaproteobacteria
GGC
Ala
>WENV170416193
CEUL01109039
781121
Gammaproteobacteria
GCA
Cys
>WENV170414988
CEUL01009550
452881
Gammaproteobacteria
TGT
Thr
>WENV170415518
CEUL01046969
276972
Gammaproteobacteria
CCA
Trp
>WENV170415619
CEUL01054425
454397
Gammaproteobacteria
TGT
Thr
>WENV170417332
CEUL01295590
276970
Gammaproteobacteria
CCG
Arg
>WENV170415997
CEUL01087269
459406
Gammaproteobacteria
TAC
Val
>WENV170414878
CEUL01002145
276372
Gammaproteobacteria
ACG
Arg
>WENV170414916
CEUL01005223
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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