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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170418986
CEUM01085343
275457
Gammaproteobacteria
ACG
Arg
>WENV170419396
CEUM01124184
457453
Gammaproteobacteria
TTT
Lys
>WENV170419452
CEUM01128048
452415
Gammaproteobacteria
GTG
His
>WENV170420043
CEUM01253853
656944
Gammaproteobacteria
CCT
Arg
>WENV170420399
CEUM01328215
474520
Gammaproteobacteria
CCA
Trp
>WENV170418830
CEUM01071213
270982
Gammaproteobacteria
GAT
Ile
>WENV170418062
CEUM01018854
272023
Gammaproteobacteria
GAT
Ile
>WENV170418438
CEUM01041551
467367
Gammaproteobacteria
GGT
Thr
>WENV170418776
CEUM01066331
276974
Gammaproteobacteria
GGG
Pro
>WENV170417746
CEUM01000218
275003
Gammaproteobacteria
CAT
Met
>WENV170419451
CEUM01128048
275462
Gammaproteobacteria
TCT
Arg
>WENV170418087
CEUM01020161
276973
Gammaproteobacteria
GAC
Val
>WENV170420041
CEUM01253772
452332
Gammaproteobacteria
GTG
His
>WENV170418239
CEUM01029164
282413
Gammaproteobacteria
ACG
Arg
>WENV170418543
CEUM01049445
278982
Gammaproteobacteria
CCG
Arg
>WENV170418372
CEUM01036968
452412
Gammaproteobacteria
GCC
Gly
>WENV170419700
CEUM01136231
452412
Gammaproteobacteria
GCC
Gly
>WENV170419563
CEUM01132327
456510
Gammaproteobacteria
GGC
Ala
>WENV170417941
CEUM01012688
301313
Gammaproteobacteria
TGG
Pro
>WENV170420302
CEUM01323412
113485
Gammaproteobacteria
CAA
Leu
>WENV170418458
CEUM01042583
452881
Gammaproteobacteria
TGT
Thr
>WENV170419695
CEUM01136065
276972
Gammaproteobacteria
CCA
Trp
>WENV170419069
CEUM01093282
276972
Gammaproteobacteria
CCA
Trp
>WENV170418765
CEUM01065497
276972
Gammaproteobacteria
CCA
Trp
>WENV170417976
CEUM01015148
276972
Gammaproteobacteria
CCA
Trp
>WENV170417887
CEUM01009569
453897
Gammaproteobacteria
TAC
Val
>WENV170420379
CEUM01328038
454397
Gammaproteobacteria
TGT
Thr
>WENV170419432
CEUM01126727
276970
Gammaproteobacteria
CCG
Arg
>WENV170417835
CEUM01005661
459406
Gammaproteobacteria
TAC
Val
>WENV170418086
CEUM01020089
452407
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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