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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170422236
CEUN01144875
180489
Alphaproteobacteria
TAG
Leu
>WENV170420925
CEUN01034172
273805
Alphaproteobacteria
ACG
Arg
>WENV170422208
CEUN01142175
455289
Alphaproteobacteria
TTT
Lys
>WENV170422373
CEUN01155279
218220
Alphaproteobacteria
>WENV170423168
CEUN01330600
274138
Alphaproteobacteria
CAT
Met
>WENV170420531
CEUN01007457
287552
Alphaproteobacteria
GAT
Ile
>WENV170422213
CEUN01142883
780346
Alphaproteobacteria
CTG
Gln
>WENV170421247
CEUN01059495
656140
Alphaproteobacteria
GAC
Val
>WENV170422846
CEUN01182320
454318
Alphaproteobacteria
GGC
Ala
>WENV170420747
CEUN01020724
780582
Alphaproteobacteria
TCC
Gly
>WENV170422102
CEUN01133613
281027
Alphaproteobacteria
CCT
Arg
>WENV170422442
CEUN01160725
779596
Alphaproteobacteria
TCC
Gly
>WENV170421579
CEUN01085589
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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