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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170430690
CEUS01001292
457171
Gammaproteobacteria
GTT
Asn
>WENV170430798
CEUS01005909
656944
Gammaproteobacteria
CCT
Arg
>WENV170430873
CEUS01009709
457171
Gammaproteobacteria
GTT
Asn
>WENV170430902
CEUS01011755
276971
Gammaproteobacteria
ACG
Arg
>WENV170430911
CEUS01012179
459406
Gammaproteobacteria
TAC
Val
>WENV170431062
CEUS01018571
46215
Gammaproteobacteria
GCT
Ser
>WENV170431210
CEUS01025639
276973
Gammaproteobacteria
GAC
Val
>WENV170431295
CEUS01029520
276974
Gammaproteobacteria
GGG
Pro
>WENV170431736
CEUS01050305
455942
Gammaproteobacteria
GCC
Gly
>WENV170431876
CEUS01058386
270982
Gammaproteobacteria
GAT
Ile
>WENV170432042
CEUS01065181
276970
Gammaproteobacteria
CCG
Arg
>WENV170432098
CEUS01068398
457171
Gammaproteobacteria
GTT
Asn
>WENV170432261
CEUS01079202
276974
Gammaproteobacteria
GGG
Pro
>WENV170432552
CEUS01100246
467367
Gammaproteobacteria
GGT
Thr
>WENV170432657
CEUS01108237
276372
Gammaproteobacteria
ACG
Arg
>WENV170433220
CEUS01156414
275457
Gammaproteobacteria
ACG
Arg
>WENV170433344
CEUS01167735
452404
Gammaproteobacteria
TGT
Thr
>WENV170433345
CEUS01167735
218035
Gammaproteobacteria
GTA
Tyr
>WENV170433346
CEUS01167735
653834
Gammaproteobacteria
TCC
Gly
>WENV170433347
CEUS01167735
452405
Gammaproteobacteria
GGT
Thr
>WENV170433456
CEUS01177627
464809
Gammaproteobacteria
GAA
Phe
>WENV170433631
CEUS01194865
781121
Gammaproteobacteria
GCA
Cys
>WENV170433693
CEUS01201254
456247
Gammaproteobacteria
CCA
Trp
>WENV170434509
CEUS01264914
113737
Gammaproteobacteria
CAA
Leu
>WENV170435013
CEUS01284315
276973
Gammaproteobacteria
GAC
Val
>WENV170435388
CEUS01445396
273870
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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