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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170435897
CEUT01004300
275457
Gammaproteobacteria
ACG
Arg
>WENV170435928
CEUT01006406
275457
Gammaproteobacteria
ACG
Arg
>WENV170435929
CEUT01006406
275457
Gammaproteobacteria
ACG
Arg
>WENV170435927
CEUT01006264
779495
Gammaproteobacteria
CCC
Gly
>WENV170436196
CEUT01028074
653594
Gammaproteobacteria
CCT
Arg
>WENV170436759
CEUT01121210
456271
Gammaproteobacteria
GCC
Gly
>WENV170436261
CEUT01035015
281115
Gammaproteobacteria
GAT
Ile
>WENV170436184
CEUT01027568
296278
Gammaproteobacteria
GAT
Ile
>WENV170435899
CEUT01004413
276971
Gammaproteobacteria
ACG
Arg
>WENV170436358
CEUT01044467
455405
Gammaproteobacteria
GGT
Thr
>WENV170436312
CEUT01040399
12379
Gammaproteobacteria
GCT
Ser
>WENV170436094
CEUT01022253
459789
Gammaproteobacteria
GTT
Asn
>WENV170436095
CEUT01022253
459789
Gammaproteobacteria
GTT
Asn
>WENV170436316
CEUT01040704
657785
Gammaproteobacteria
TTG
Gln
>WENV170436640
CEUT01078529
276973
Gammaproteobacteria
GAC
Val
>WENV170436114
CEUT01022823
452332
Gammaproteobacteria
GTG
His
>WENV170436201
CEUT01029106
179997
Gammaproteobacteria
GTA
Tyr
>WENV170436190
CEUT01027876
451876
Gammaproteobacteria
GTG
His
>WENV170436315
CEUT01040704
454424
Gammaproteobacteria
GAA
Phe
>WENV170436841
CEUT01141586
179999
Gammaproteobacteria
CAA
Leu
>WENV170435868
CEUT01001323
781121
Gammaproteobacteria
GCA
Cys
>WENV170436270
CEUT01036562
45712
Gammaproteobacteria
GGA
Ser
>WENV170435997
CEUT01012774
86900
Gammaproteobacteria
TGA
Ser
>WENV170436265
CEUT01035811
271613
Gammaproteobacteria
GTC
Asp
>WENV170436289
CEUT01038612
276972
Gammaproteobacteria
CCA
Trp
>WENV170436193
CEUT01027899
270907
Gammaproteobacteria
TGG
Pro
>WENV170435999
CEUT01012774
779494
Gammaproteobacteria
GCA
Cys
>WENV170435934
CEUT01007529
451870
Gammaproteobacteria
CCA
Trp
>WENV170436177
CEUT01027227
271316
Gammaproteobacteria
CAT
Met
>WENV170436058
CEUT01017196
30792
Gammaproteobacteria
GGA
Ser
>WENV170436344
CEUT01043291
271253
Gammaproteobacteria
CAT
Met
>WENV170435898
CEUT01004413
20134
Gammaproteobacteria
GCT
Ser
>WENV170436499
CEUT01060257
270904
Gammaproteobacteria
CGG
Pro
>WENV170436135
CEUT01024390
117395
Gammaproteobacteria
CAG
Leu
>WENV170436134
CEUT01024390
117395
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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