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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170437689
CEUU01058577
453181
Gammaproteobacteria
GTG
His
>WENV170437354
CEUU01032404
467367
Gammaproteobacteria
GGT
Thr
>WENV170437058
CEUU01011206
276974
Gammaproteobacteria
GGG
Pro
>WENV170437312
CEUU01028853
30865
Gammaproteobacteria
GCT
Ser
>WENV170437234
CEUU01022761
455405
Gammaproteobacteria
GGT
Thr
>WENV170438236
CEUU01109263
276973
Gammaproteobacteria
GAC
Val
>WENV170437083
CEUU01012831
278982
Gammaproteobacteria
CCG
Arg
>WENV170437006
CEUU01007591
452412
Gammaproteobacteria
GCC
Gly
>WENV170437851
CEUU01073654
459731
Gammaproteobacteria
GGT
Thr
>WENV170438357
CEUU01114054
276972
Gammaproteobacteria
CCA
Trp
>WENV170438124
CEUU01100868
276972
Gammaproteobacteria
CCA
Trp
>WENV170438390
CEUU01114493
271286
Gammaproteobacteria
CAT
Met
>WENV170437688
CEUU01058577
291687
Gammaproteobacteria
TCT
Arg
>WENV170437687
CEUU01058577
276975
Gammaproteobacteria
TGG
Pro
>WENV170436922
CEUU01002577
459406
Gammaproteobacteria
TAC
Val
>WENV170437625
CEUU01055156
30792
Gammaproteobacteria
GGA
Ser
>WENV170438624
CEUU01207933
452407
Gammaproteobacteria
GAA
Phe
>WENV170436933
CEUU01003292
274093
Gammaproteobacteria
GTC
Asp
>WENV170437749
CEUU01064381
274093
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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