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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170443024
CEUW01091850
474520
Gammaproteobacteria
CCA
Trp
>WENV170443616
CEUW01248869
30865
Gammaproteobacteria
GCT
Ser
>WENV170442223
CEUW01019441
455405
Gammaproteobacteria
GGT
Thr
>WENV170443686
CEUW01253414
278982
Gammaproteobacteria
CCG
Arg
>WENV170442345
CEUW01030028
452412
Gammaproteobacteria
GCC
Gly
>WENV170442252
CEUW01022243
456510
Gammaproteobacteria
GGC
Ala
>WENV170442674
CEUW01059235
459731
Gammaproteobacteria
GGT
Thr
>WENV170442576
CEUW01048421
452881
Gammaproteobacteria
TGT
Thr
>WENV170443190
CEUW01098726
276972
Gammaproteobacteria
CCA
Trp
>WENV170443658
CEUW01252733
271286
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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