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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170453924
CEVA01012444
455289
Alphaproteobacteria
TTT
Lys
>WENV170457523
CEVA01454610
479047
Alphaproteobacteria
TTT
Lys
>WENV170455386
CEVA01107056
655363
Alphaproteobacteria
GGT
Thr
>WENV170456629
CEVA01220561
274144
Alphaproteobacteria
GTG
His
>WENV170455294
CEVA01100472
655358
Alphaproteobacteria
TTG
Gln
>WENV170455434
CEVA01110453
270799
Alphaproteobacteria
CAT
Met
>WENV170456633
CEVA01220817
780327
Alphaproteobacteria
GCA
Cys
>WENV170453943
CEVA01013830
655166
Alphaproteobacteria
CAC
Val
>WENV170454780
CEVA01060094
454512
Alphaproteobacteria
CCA
Trp
>WENV170456242
CEVA01187865
655361
Alphaproteobacteria
GCC
Gly
>WENV170456010
CEVA01162963
154064
Alphaproteobacteria
CAG
Leu
>WENV170454748
CEVA01057767
274133
Alphaproteobacteria
ACG
Arg
>WENV170454674
CEVA01053040
454318
Alphaproteobacteria
GGC
Ala
>WENV170457235
CEVA01316307
112839
Alphaproteobacteria
CAG
Leu
>WENV170454819
CEVA01062628
46069
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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