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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170454732
CEVA01056610
275457
Gammaproteobacteria
ACG
Arg
>WENV170453899
CEVA01010966
273854
Gammaproteobacteria
CAT
Met
>WENV170453843
CEVA01007638
779604
Gammaproteobacteria
GCA
Cys
>WENV170453999
CEVA01017697
779604
Gammaproteobacteria
GCA
Cys
>WENV170454031
CEVA01018996
779604
Gammaproteobacteria
GCA
Cys
>WENV170456790
CEVA01232006
457453
Gammaproteobacteria
TTT
Lys
>WENV170455523
CEVA01118391
275465
Gammaproteobacteria
GAC
Val
>WENV170457388
CEVA01395899
452415
Gammaproteobacteria
GTG
His
>WENV170456280
CEVA01191114
656944
Gammaproteobacteria
CCT
Arg
>WENV170454453
CEVA01039961
656944
Gammaproteobacteria
CCT
Arg
>WENV170454152
CEVA01024773
283311
Gammaproteobacteria
ACG
Arg
>WENV170453761
CEVA01002397
281965
Gammaproteobacteria
TCT
Arg
>WENV170455180
CEVA01089665
474520
Gammaproteobacteria
CCA
Trp
>WENV170456741
CEVA01228848
218020
Gammaproteobacteria
GAG
Leu
>WENV170454531
CEVA01044881
273870
Gammaproteobacteria
ACG
Arg
>WENV170454532
CEVA01044881
273870
Gammaproteobacteria
ACG
Arg
>WENV170453953
CEVA01014591
456706
Gammaproteobacteria
TGT
Thr
>WENV170454874
CEVA01066886
456706
Gammaproteobacteria
TGT
Thr
>WENV170455892
CEVA01150116
456706
Gammaproteobacteria
TGT
Thr
>WENV170455239
CEVA01095379
276974
Gammaproteobacteria
GGG
Pro
>WENV170456181
CEVA01182036
502832
Gammaproteobacteria
GAA
Phe
>WENV170455254
CEVA01097103
454967
Gammaproteobacteria
TTT
Lys
>WENV170456611
CEVA01218691
275003
Gammaproteobacteria
CAT
Met
>WENV170454536
CEVA01045258
655755
Gammaproteobacteria
TTG
Gln
>WENV170454477
CEVA01041386
270818
Gammaproteobacteria
CCG
Arg
>WENV170455419
CEVA01109316
457171
Gammaproteobacteria
GTT
Asn
>WENV170456671
CEVA01224249
274864
Gammaproteobacteria
ACG
Arg
>WENV170454530
CEVA01044881
12379
Gammaproteobacteria
GCT
Ser
>WENV170454640
CEVA01051916
451982
Gammaproteobacteria
GGC
Ala
>WENV170456513
CEVA01210748
451982
Gammaproteobacteria
GGC
Ala
>WENV170454835
CEVA01063736
270689
Gammaproteobacteria
TCG
Arg
>WENV170455205
CEVA01092521
271458
Gammaproteobacteria
GGG
Pro
>WENV170454207
CEVA01026929
452416
Gammaproteobacteria
TTT
Lys
>WENV170454208
CEVA01026929
452416
Gammaproteobacteria
TTT
Lys
>WENV170455181
CEVA01089834
271254
Gammaproteobacteria
CAT
Met
>WENV170454158
CEVA01025092
180704
Gammaproteobacteria
CAA
Leu
>WENV170453794
CEVA01004874
273857
Gammaproteobacteria
TGG
Pro
>WENV170453760
CEVA01002397
273756
Gammaproteobacteria
TGG
Pro
>WENV170454159
CEVA01025092
273749
Gammaproteobacteria
CCA
Trp
>WENV170454710
CEVA01055121
273749
Gammaproteobacteria
CCA
Trp
>WENV170455023
CEVA01077648
464809
Gammaproteobacteria
GAA
Phe
>WENV170456587
CEVA01216804
464809
Gammaproteobacteria
GAA
Phe
>WENV170456604
CEVA01218118
276973
Gammaproteobacteria
GAC
Val
>WENV170455724
CEVA01134348
276973
Gammaproteobacteria
GAC
Val
>WENV170454270
CEVA01029165
276973
Gammaproteobacteria
GAC
Val
>WENV170456984
CEVA01241064
30510
Gammaproteobacteria
GGA
Ser
>WENV170454626
CEVA01051075
114536
Gammaproteobacteria
CAA
Leu
>WENV170454699
CEVA01054378
275915
Gammaproteobacteria
GGG
Pro
>WENV170454408
CEVA01037859
282413
Gammaproteobacteria
ACG
Arg
>WENV170454316
CEVA01031509
779470
Gammaproteobacteria
GCA
Cys
>WENV170453842
CEVA01007638
452412
Gammaproteobacteria
GCC
Gly
>WENV170455268
CEVA01097586
218101
Gammaproteobacteria
GTA
Tyr
>WENV170456383
CEVA01200466
30520
Gammaproteobacteria
TGA
Ser
>WENV170454449
CEVA01039779
780765
Gammaproteobacteria
CCC
Gly
>WENV170453995
CEVA01017555
273696
Gammaproteobacteria
ACG
Arg
>WENV170456703
CEVA01226521
481346
Gammaproteobacteria
GTT
Asn
>WENV170454467
CEVA01040693
465220
Gammaproteobacteria
GCC
Gly
>WENV170453795
CEVA01004874
273858
Gammaproteobacteria
TCT
Arg
>WENV170455932
CEVA01154283
275549
Gammaproteobacteria
CAT
Met
>WENV170456105
CEVA01175228
301313
Gammaproteobacteria
TGG
Pro
>WENV170455335
CEVA01102281
274148
Gammaproteobacteria
GTC
Asp
>WENV170455215
CEVA01093115
273719
Gammaproteobacteria
CAT
Met
>WENV170455546
CEVA01119990
781121
Gammaproteobacteria
GCA
Cys
>WENV170454135
CEVA01023580
273869
Gammaproteobacteria
GTT
Asn
>WENV170455738
CEVA01136052
271200
Gammaproteobacteria
CAT
Met
>WENV170457750
CEVA01509358
780557
Gammaproteobacteria
GCA
Cys
>WENV170456381
CEVA01200349
451645
Gammaproteobacteria
GTT
Asn
>WENV170455597
CEVA01124258
459731
Gammaproteobacteria
GGT
Thr
>WENV170456464
CEVA01206555
113485
Gammaproteobacteria
CAA
Leu
>WENV170454469
CEVA01040807
113485
Gammaproteobacteria
CAA
Leu
>WENV170454934
CEVA01071370
452881
Gammaproteobacteria
TGT
Thr
>WENV170454478
CEVA01041386
451782
Gammaproteobacteria
GTG
His
>WENV170454646
CEVA01052398
271613
Gammaproteobacteria
GTC
Asp
>WENV170455234
CEVA01094694
271613
Gammaproteobacteria
GTC
Asp
>WENV170457234
CEVA01315372
270692
Gammaproteobacteria
CAT
Met
>WENV170455243
CEVA01096259
452410
Gammaproteobacteria
TAC
Val
>WENV170454215
CEVA01027047
270822
Gammaproteobacteria
CCA
Trp
>WENV170454143
CEVA01024378
276972
Gammaproteobacteria
CCA
Trp
>WENV170455077
CEVA01082222
270905
Gammaproteobacteria
CCG
Arg
>WENV170456250
CEVA01188301
454808
Gammaproteobacteria
CAT
Met
>WENV170455282
CEVA01099034
454397
Gammaproteobacteria
TGT
Thr
>WENV170453931
CEVA01013137
454397
Gammaproteobacteria
TGT
Thr
>WENV170455952
CEVA01156857
31220
Gammaproteobacteria
GCT
Ser
>WENV170455091
CEVA01082897
270823
Gammaproteobacteria
TGG
Pro
>WENV170454151
CEVA01024772
456267
Gammaproteobacteria
GAA
Phe
>WENV170456428
CEVA01203512
276372
Gammaproteobacteria
ACG
Arg
>WENV170456227
CEVA01185199
30792
Gammaproteobacteria
GGA
Ser
>WENV170454318
CEVA01031802
30792
Gammaproteobacteria
GGA
Ser
>WENV170455345
CEVA01102984
180477
Gammaproteobacteria
TAG
Leu
>WENV170456959
CEVA01240195
452407
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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