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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170459898
CEVC01094283
779604
Gammaproteobacteria
GCA
Cys
>WENV170460263
CEVC01132869
274150
Gammaproteobacteria
CAT
Met
>WENV170459822
CEVC01086020
270982
Gammaproteobacteria
GAT
Ile
>WENV170458770
CEVC01002022
467367
Gammaproteobacteria
GGT
Thr
>WENV170460301
CEVC01137239
456706
Gammaproteobacteria
TGT
Thr
>WENV170459584
CEVC01066684
464809
Gammaproteobacteria
GAA
Phe
>WENV170461076
CEVC01269311
452332
Gammaproteobacteria
GTG
His
>WENV170459381
CEVC01049861
460378
Gammaproteobacteria
TAC
Val
>WENV170460929
CEVC01185162
456510
Gammaproteobacteria
GGC
Ala
>WENV170461293
CEVC01347930
452404
Gammaproteobacteria
TGT
Thr
>WENV170460507
CEVC01157780
271459
Gammaproteobacteria
CCT
Arg
>WENV170460982
CEVC01217927
781121
Gammaproteobacteria
GCA
Cys
>WENV170459398
CEVC01051241
271200
Gammaproteobacteria
CAT
Met
>WENV170459677
CEVC01075372
456709
Gammaproteobacteria
TGC
Ala
>WENV170459857
CEVC01090165
459731
Gammaproteobacteria
GGT
Thr
>WENV170459475
CEVC01056747
452881
Gammaproteobacteria
TGT
Thr
>WENV170461128
CEVC01297309
112371
Gammaproteobacteria
CAA
Leu
>WENV170458774
CEVC01002423
274093
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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