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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170462413
CEVD01062022
656944
Gammaproteobacteria
CCT
Arg
>WENV170462384
CEVD01059472
270982
Gammaproteobacteria
GAT
Ile
>WENV170462536
CEVD01069307
270982
Gammaproteobacteria
GAT
Ile
>WENV170462192
CEVD01044970
272023
Gammaproteobacteria
GAT
Ile
>WENV170462411
CEVD01062005
467367
Gammaproteobacteria
GGT
Thr
>WENV170462607
CEVD01073958
458351
Gammaproteobacteria
TTG
Gln
>WENV170461633
CEVD01013020
276971
Gammaproteobacteria
ACG
Arg
>WENV170461632
CEVD01013020
276971
Gammaproteobacteria
ACG
Arg
>WENV170462227
CEVD01047757
457171
Gammaproteobacteria
GTT
Asn
>WENV170464770
CEVD01221482
276973
Gammaproteobacteria
GAC
Val
>WENV170463054
CEVD01108008
780096
Gammaproteobacteria
GCA
Cys
>WENV170461491
CEVD01005886
452412
Gammaproteobacteria
GCC
Gly
>WENV170463663
CEVD01165197
452412
Gammaproteobacteria
GCC
Gly
>WENV170464022
CEVD01188983
780765
Gammaproteobacteria
CCC
Gly
>WENV170461962
CEVD01032702
301313
Gammaproteobacteria
TGG
Pro
>WENV170461854
CEVD01025310
781121
Gammaproteobacteria
GCA
Cys
>WENV170462594
CEVD01073189
459731
Gammaproteobacteria
GGT
Thr
>WENV170463407
CEVD01140760
113485
Gammaproteobacteria
CAA
Leu
>WENV170463824
CEVD01176021
276972
Gammaproteobacteria
CCA
Trp
>WENV170462757
CEVD01084778
276970
Gammaproteobacteria
CCG
Arg
>WENV170463137
CEVD01115925
459406
Gammaproteobacteria
TAC
Val
>WENV170463554
CEVD01154626
276372
Gammaproteobacteria
ACG
Arg
>WENV170461839
CEVD01024121
30792
Gammaproteobacteria
GGA
Ser
>WENV170461631
CEVD01013020
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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