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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170468151
CEVF01013993
275457
Gammaproteobacteria
ACG
Arg
>WENV170468152
CEVF01013993
275457
Gammaproteobacteria
ACG
Arg
>WENV170468716
CEVF01054370
779604
Gammaproteobacteria
GCA
Cys
>WENV170469568
CEVF01125706
271464
Gammaproteobacteria
TGG
Pro
>WENV170468831
CEVF01064974
452415
Gammaproteobacteria
GTG
His
>WENV170468262
CEVF01020317
274166
Gammaproteobacteria
GAC
Val
>WENV170470624
CEVF01306972
474520
Gammaproteobacteria
CCA
Trp
>WENV170468070
CEVF01008396
270982
Gammaproteobacteria
GAT
Ile
>WENV170468334
CEVF01025586
467367
Gammaproteobacteria
GGT
Thr
>WENV170469748
CEVF01139264
456706
Gammaproteobacteria
TGT
Thr
>WENV170468215
CEVF01018242
275003
Gammaproteobacteria
CAT
Met
>WENV170468287
CEVF01022044
455405
Gammaproteobacteria
GGT
Thr
>WENV170468552
CEVF01042634
451982
Gammaproteobacteria
GGC
Ala
>WENV170468736
CEVF01055919
464809
Gammaproteobacteria
GAA
Phe
>WENV170468057
CEVF01007668
276973
Gammaproteobacteria
GAC
Val
>WENV170467999
CEVF01003584
276973
Gammaproteobacteria
GAC
Val
>WENV170469174
CEVF01091617
780642
Gammaproteobacteria
GCA
Cys
>WENV170468658
CEVF01050838
282413
Gammaproteobacteria
ACG
Arg
>WENV170468923
CEVF01071216
46215
Gammaproteobacteria
GCT
Ser
>WENV170468664
CEVF01051081
278982
Gammaproteobacteria
CCG
Arg
>WENV170468950
CEVF01072781
452412
Gammaproteobacteria
GCC
Gly
>WENV170468487
CEVF01036923
460378
Gammaproteobacteria
TAC
Val
>WENV170468509
CEVF01038811
113737
Gammaproteobacteria
CAA
Leu
>WENV170468163
CEVF01014527
301313
Gammaproteobacteria
TGG
Pro
>WENV170469380
CEVF01110637
781121
Gammaproteobacteria
GCA
Cys
>WENV170469140
CEVF01088995
271613
Gammaproteobacteria
GTC
Asp
>WENV170469474
CEVF01118224
276972
Gammaproteobacteria
CCA
Trp
>WENV170468801
CEVF01061043
276972
Gammaproteobacteria
CCA
Trp
>WENV170468280
CEVF01021754
276972
Gammaproteobacteria
CCA
Trp
>WENV170467974
CEVF01002291
276972
Gammaproteobacteria
CCA
Trp
>WENV170469526
CEVF01121795
454397
Gammaproteobacteria
TGT
Thr
>WENV170469997
CEVF01152265
452414
Gammaproteobacteria
TTC
Glu
>WENV170470371
CEVF01255246
276970
Gammaproteobacteria
CCG
Arg
>WENV170470265
CEVF01220485
30354
Gammaproteobacteria
TGA
Ser
>WENV170468282
CEVF01021959
452407
Gammaproteobacteria
GAA
Phe
>WENV170468797
CEVF01060568
274093
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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