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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170476814
CEVI01216733
218595
Alphaproteobacteria
CAA
Leu
>WENV170476252
CEVI01090898
273797
Alphaproteobacteria
GGG
Pro
>WENV170475745
CEVI01028423
46086
Alphaproteobacteria
CGA
Ser
>WENV170476207
CEVI01083333
780326
Alphaproteobacteria
CCC
Gly
>WENV170476156
CEVI01077638
452884
Alphaproteobacteria
CCA
Trp
>WENV170476389
CEVI01106047
46070
Alphaproteobacteria
CGA
Ser
>WENV170476233
CEVI01087899
653534
Alphaproteobacteria
GCC
Gly
>WENV170476324
CEVI01097733
274127
Alphaproteobacteria
GTG
His
>WENV170476573
CEVI01123371
30553
Alphaproteobacteria
GGA
Ser
>WENV170475627
CEVI01018210
780331
Alphaproteobacteria
TCC
Gly
>WENV170476015
CEVI01060774
780331
Alphaproteobacteria
TCC
Gly
>WENV170476829
CEVI01219807
456473
Alphaproteobacteria
GGC
Ala
>WENV170475985
CEVI01057560
654960
Alphaproteobacteria
CTC
Glu
>WENV170475844
CEVI01040520
655171
Alphaproteobacteria
GGT
Thr
>WENV170476530
CEVI01120030
277664
Alphaproteobacteria
GTC
Asp
>WENV170475925
CEVI01050979
451755
Alphaproteobacteria
TGC
Ala
>WENV170476203
CEVI01083102
655849
Alphaproteobacteria
TTG
Gln
>WENV170476280
CEVI01093379
655359
Alphaproteobacteria
GAC
Val
>WENV170476268
CEVI01091682
154065
Alphaproteobacteria
GAG
Leu
>WENV170476802
CEVI01214329
153953
Alphaproteobacteria
TAA
Leu
>WENV170476621
CEVI01137318
282775
Alphaproteobacteria
TCT
Arg
>WENV170475752
CEVI01029399
451742
Alphaproteobacteria
GGC
Ala
>WENV170475753
CEVI01029399
451742
Alphaproteobacteria
GGC
Ala
>WENV170475903
CEVI01048758
451742
Alphaproteobacteria
GGC
Ala
>WENV170475670
CEVI01022529
655363
Alphaproteobacteria
GGT
Thr
>WENV170476521
CEVI01118825
274144
Alphaproteobacteria
GTG
His
>WENV170475739
CEVI01028095
455172
Alphaproteobacteria
GGC
Ala
>WENV170475765
CEVI01030883
455172
Alphaproteobacteria
GGC
Ala
>WENV170475979
CEVI01056533
273450
Alphaproteobacteria
TCT
Arg
>WENV170476445
CEVI01111852
274131
Alphaproteobacteria
CAT
Met
>WENV170476355
CEVI01101750
655358
Alphaproteobacteria
TTG
Gln
>WENV170475572
CEVI01013224
113204
Alphaproteobacteria
GAG
Leu
>WENV170476302
CEVI01094597
46072
Alphaproteobacteria
GCT
Ser
>WENV170476842
CEVI01222981
655166
Alphaproteobacteria
CAC
Val
>WENV170475655
CEVI01021515
454512
Alphaproteobacteria
CCA
Trp
>WENV170475854
CEVI01041391
454056
Alphaproteobacteria
CGT
Thr
>WENV170476541
CEVI01121260
273803
Alphaproteobacteria
CCT
Arg
>WENV170476479
CEVI01115915
455360
Alphaproteobacteria
CGC
Ala
>WENV170475808
CEVI01036689
275204
Alphaproteobacteria
ACG
Arg
>WENV170475610
CEVI01017230
270796
Alphaproteobacteria
GTC
Asp
>WENV170476408
CEVI01107737
655361
Alphaproteobacteria
GCC
Gly
>WENV170476235
CEVI01088683
154064
Alphaproteobacteria
CAG
Leu
>WENV170476522
CEVI01118826
274141
Alphaproteobacteria
CCT
Arg
>WENV170476477
CEVI01115584
274132
Alphaproteobacteria
TGG
Pro
>WENV170476095
CEVI01070358
274133
Alphaproteobacteria
ACG
Arg
>WENV170475993
CEVI01058307
780346
Alphaproteobacteria
CTG
Gln
>WENV170476090
CEVI01069873
270791
Alphaproteobacteria
CAT
Met
>WENV170476086
CEVI01069662
112839
Alphaproteobacteria
CAG
Leu
>WENV170475893
CEVI01047546
46069
Alphaproteobacteria
GGA
Ser
>WENV170476070
CEVI01067743
274130
Alphaproteobacteria
CGG
Pro
>WENV170476680
CEVI01164026
653539
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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