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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170476882
CEVJ01001729
455289
Alphaproteobacteria
TTT
Lys
>WENV170476901
CEVJ01002848
270791
Alphaproteobacteria
CAT
Met
>WENV170476902
CEVJ01002909
30553
Alphaproteobacteria
GGA
Ser
>WENV170476973
CEVJ01014039
113188
Alphaproteobacteria
GAG
Leu
>WENV170477021
CEVJ01020709
455172
Alphaproteobacteria
GGC
Ala
>WENV170477057
CEVJ01026254
456891
Alphaproteobacteria
CGT
Thr
>WENV170477064
CEVJ01027620
654103
Alphaproteobacteria
GAA
Phe
>WENV170477065
CEVJ01027653
655849
Alphaproteobacteria
TTG
Gln
>WENV170477147
CEVJ01040342
653534
Alphaproteobacteria
GCC
Gly
>WENV170477173
CEVJ01042690
274224
Alphaproteobacteria
CAT
Met
>WENV170477187
CEVJ01043898
456473
Alphaproteobacteria
GGC
Ala
>WENV170477193
CEVJ01044753
655166
Alphaproteobacteria
CAC
Val
>WENV170477233
CEVJ01049318
275204
Alphaproteobacteria
ACG
Arg
>WENV170477320
CEVJ01059940
455289
Alphaproteobacteria
TTT
Lys
>WENV170477359
CEVJ01063801
113204
Alphaproteobacteria
GAG
Leu
>WENV170477393
CEVJ01068422
663828
Alphaproteobacteria
TTC
Glu
>WENV170477397
CEVJ01068993
454912
Alphaproteobacteria
GGC
Ala
>WENV170477439
CEVJ01074057
218595
Alphaproteobacteria
CAA
Leu
>WENV170477456
CEVJ01075508
274144
Alphaproteobacteria
GTG
His
>WENV170477489
CEVJ01079840
780346
Alphaproteobacteria
CTG
Gln
>WENV170477498
CEVJ01080735
46070
Alphaproteobacteria
CGA
Ser
>WENV170477518
CEVJ01081163
454056
Alphaproteobacteria
CGT
Thr
>WENV170477522
CEVJ01081842
455172
Alphaproteobacteria
GGC
Ala
>WENV170477590
CEVJ01087989
655421
Alphaproteobacteria
GGT
Thr
>WENV170477616
CEVJ01090964
19999
Alphaproteobacteria
GCT
Ser
>WENV170477618
CEVJ01091031
655361
Alphaproteobacteria
GCC
Gly
>WENV170477623
CEVJ01091385
482745
Alphaproteobacteria
TAC
Val
>WENV170477643
CEVJ01092354
653532
Alphaproteobacteria
GTT
Asn
>WENV170477669
CEVJ01094040
673402
Alphaproteobacteria
TTG
Gln
>WENV170477687
CEVJ01095066
656063
Alphaproteobacteria
GAC
Val
>WENV170477724
CEVJ01107244
271268
Alphaproteobacteria
CAT
Met
>WENV170477764
CEVJ01125411
291540
Alphaproteobacteria
TGG
Pro
>WENV170477799
CEVJ01138403
180423
Alphaproteobacteria
CAA
Leu
>WENV170477879
CEVJ01168260
653537
Alphaproteobacteria
GGT
Thr
>WENV170477910
CEVJ01179935
45799
Alphaproteobacteria
GCT
Ser
>WENV170477980
CEVJ01195290
454059
Alphaproteobacteria
TTT
Lys
>WENV170477988
CEVJ01196855
274141
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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