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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170482259
CEVM01016658
218595
Alphaproteobacteria
CAA
Leu
>WENV170482667
CEVM01049870
653537
Alphaproteobacteria
GGT
Thr
>WENV170483111
CEVM01090598
664335
Alphaproteobacteria
TTC
Glu
>WENV170482624
CEVM01045449
45799
Alphaproteobacteria
GCT
Ser
>WENV170483294
CEVM01108278
452629
Alphaproteobacteria
GAA
Phe
>WENV170482075
CEVM01004327
30553
Alphaproteobacteria
GGA
Ser
>WENV170483523
CEVM01124404
30553
Alphaproteobacteria
GGA
Ser
>WENV170482285
CEVM01018921
780331
Alphaproteobacteria
TCC
Gly
>WENV170482099
CEVM01006287
456473
Alphaproteobacteria
GGC
Ala
>WENV170482986
CEVM01076748
656156
Alphaproteobacteria
GCC
Gly
>WENV170483150
CEVM01094572
218119
Alphaproteobacteria
>WENV170484057
CEVM01252017
277664
Alphaproteobacteria
GTC
Asp
>WENV170483385
CEVM01115810
451755
Alphaproteobacteria
TGC
Ala
>WENV170483456
CEVM01120793
655849
Alphaproteobacteria
TTG
Gln
>WENV170483503
CEVM01123771
274224
Alphaproteobacteria
CAT
Met
>WENV170483032
CEVM01081043
653532
Alphaproteobacteria
GTT
Asn
>WENV170482538
CEVM01038917
653532
Alphaproteobacteria
GTT
Asn
>WENV170482252
CEVM01016259
655363
Alphaproteobacteria
GGT
Thr
>WENV170482589
CEVM01042855
455172
Alphaproteobacteria
GGC
Ala
>WENV170483666
CEVM01129640
274131
Alphaproteobacteria
CAT
Met
>WENV170482485
CEVM01034383
779636
Alphaproteobacteria
CTG
Gln
>WENV170482544
CEVM01039182
47329
Alphaproteobacteria
TGA
Ser
>WENV170484080
CEVM01256963
454059
Alphaproteobacteria
TTT
Lys
>WENV170482674
CEVM01050655
113188
Alphaproteobacteria
GAG
Leu
>WENV170483761
CEVM01173546
451850
Alphaproteobacteria
TAC
Val
>WENV170483193
CEVM01099147
113204
Alphaproteobacteria
GAG
Leu
>WENV170483231
CEVM01103033
456892
Alphaproteobacteria
CGC
Ala
>WENV170483062
CEVM01084179
655361
Alphaproteobacteria
GCC
Gly
>WENV170483189
CEVM01098964
451756
Alphaproteobacteria
CCA
Trp
>WENV170483716
CEVM01153854
454912
Alphaproteobacteria
GGC
Ala
>WENV170483354
CEVM01113402
654103
Alphaproteobacteria
GAA
Phe
>WENV170483962
CEVM01230006
301299
Alphaproteobacteria
CCG
Arg
>WENV170482311
CEVM01021166
653539
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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