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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170484187
CEVN01003641
655271
Alphaproteobacteria
GGT
Thr
>WENV170484411
CEVN01020220
275843
Alphaproteobacteria
CCT
Arg
>WENV170484419
CEVN01020547
655624
Alphaproteobacteria
TTG
Gln
>WENV170484500
CEVN01025970
656140
Alphaproteobacteria
GAC
Val
>WENV170484736
CEVN01041324
454059
Alphaproteobacteria
TTT
Lys
>WENV170484977
CEVN01063941
273603
Alphaproteobacteria
TGG
Pro
>WENV170485114
CEVN01075409
294326
Alphaproteobacteria
CCG
Arg
>WENV170485319
CEVN01095965
218220
Alphaproteobacteria
>WENV170485531
CEVN01114710
653539
Alphaproteobacteria
GAC
Val
>WENV170485585
CEVN01119402
653532
Alphaproteobacteria
GTT
Asn
>WENV170485686
CEVN01130232
270798
Alphaproteobacteria
CGG
Pro
>WENV170485854
CEVN01144452
270792
Alphaproteobacteria
CAT
Met
>WENV170485911
CEVN01149171
457318
Alphaproteobacteria
CGT
Thr
>WENV170486027
CEVN01155115
113418
Alphaproteobacteria
CAG
Leu
>WENV170486070
CEVN01156841
277700
Alphaproteobacteria
GTG
His
>WENV170486136
CEVN01158417
180729
Alphaproteobacteria
CAG
Leu
>WENV170486761
CEVN01363448
655566
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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