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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170487115
CEVO01026384
457453
Gammaproteobacteria
TTT
Lys
>WENV170487032
CEVO01018077
273856
Gammaproteobacteria
GAC
Val
>WENV170487075
CEVO01023268
273870
Gammaproteobacteria
ACG
Arg
>WENV170488449
CEVO01211579
779641
Gammaproteobacteria
TCC
Gly
>WENV170486866
CEVO01004342
180112
Gammaproteobacteria
TAG
Leu
>WENV170487787
CEVO01092547
653944
Gammaproteobacteria
GCC
Gly
>WENV170487189
CEVO01033100
452597
Gammaproteobacteria
TTG
Gln
>WENV170487963
CEVO01110216
273853
Gammaproteobacteria
CAT
Met
>WENV170487274
CEVO01041420
272104
Gammaproteobacteria
CGG
Pro
>WENV170487384
CEVO01051247
452412
Gammaproteobacteria
GCC
Gly
>WENV170486972
CEVO01013802
275658
Gammaproteobacteria
TGG
Pro
>WENV170487663
CEVO01079426
781121
Gammaproteobacteria
GCA
Cys
>WENV170487750
CEVO01088097
113235
Gammaproteobacteria
GAG
Leu
>WENV170488447
CEVO01211579
452607
Gammaproteobacteria
TGT
Thr
>WENV170487226
CEVO01037034
458525
Gammaproteobacteria
TAC
Val
>WENV170488263
CEVO01148765
271616
Gammaproteobacteria
CAT
Met
>WENV170487547
CEVO01068239
454425
Gammaproteobacteria
TGT
Thr
>WENV170486850
CEVO01003336
296667
Gammaproteobacteria
GAT
Ile
>WENV170488475
CEVO01217111
452603
Gammaproteobacteria
CCA
Trp
>WENV170486882
CEVO01005297
780764
Gammaproteobacteria
TCC
Gly
>WENV170488448
CEVO01211579
218041
Gammaproteobacteria
GTA
Tyr
>WENV170488450
CEVO01211579
655603
Gammaproteobacteria
GGT
Thr
>WENV170488172
CEVO01124481
274204
Gammaproteobacteria
GGG
Pro
>WENV170488406
CEVO01200363
87460
Gammaproteobacteria
GGA
Ser
>WENV170486985
CEVO01014662
466186
Gammaproteobacteria
TGC
Ala
>WENV170487967
CEVO01110754
276372
Gammaproteobacteria
ACG
Arg
>WENV170487883
CEVO01102147
271253
Gammaproteobacteria
CAT
Met
>WENV170487751
CEVO01088097
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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