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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170490435
CEVQ01000199
270982
Gammaproteobacteria
GAT
Ile
>WENV170490451
CEVQ01000851
455405
Gammaproteobacteria
GGT
Thr
>WENV170490492
CEVQ01002139
452377
Gammaproteobacteria
GTT
Asn
>WENV170490598
CEVQ01007492
20134
Gammaproteobacteria
GCT
Ser
>WENV170490599
CEVQ01007492
276971
Gammaproteobacteria
ACG
Arg
>WENV170490765
CEVQ01017232
276972
Gammaproteobacteria
CCA
Trp
>WENV170491021
CEVQ01032889
272023
Gammaproteobacteria
GAT
Ile
>WENV170491094
CEVQ01036041
275457
Gammaproteobacteria
ACG
Arg
>WENV170491095
CEVQ01036041
275457
Gammaproteobacteria
ACG
Arg
>WENV170491439
CEVQ01064112
452412
Gammaproteobacteria
GCC
Gly
>WENV170491737
CEVQ01089969
112363
Gammaproteobacteria
CAA
Leu
>WENV170491831
CEVQ01099533
276975
Gammaproteobacteria
TGG
Pro
>WENV170491832
CEVQ01099533
276976
Gammaproteobacteria
TCT
Arg
>WENV170491901
CEVQ01103455
452332
Gammaproteobacteria
GTG
His
>WENV170492024
CEVQ01113330
780642
Gammaproteobacteria
GCA
Cys
>WENV170492125
CEVQ01121486
45684
Gammaproteobacteria
GCT
Ser
>WENV170492130
CEVQ01121694
457171
Gammaproteobacteria
GTT
Asn
>WENV170492303
CEVQ01132014
113485
Gammaproteobacteria
CAA
Leu
>WENV170492309
CEVQ01132094
456706
Gammaproteobacteria
TGT
Thr
>WENV170492332
CEVQ01133211
656944
Gammaproteobacteria
CCT
Arg
>WENV170492398
CEVQ01136207
271613
Gammaproteobacteria
GTC
Asp
>WENV170492532
CEVQ01140654
276974
Gammaproteobacteria
GGG
Pro
>WENV170492544
CEVQ01140769
276972
Gammaproteobacteria
CCA
Trp
>WENV170492562
CEVQ01140910
781121
Gammaproteobacteria
GCA
Cys
>WENV170492586
CEVQ01140954
30792
Gammaproteobacteria
GGA
Ser
>WENV170493077
CEVQ01316012
270689
Gammaproteobacteria
TCG
Arg
>WENV170493397
CEVQ01358488
276973
Gammaproteobacteria
GAC
Val
>WENV170493404
CEVQ01358629
276970
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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