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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170499565
CEVT01174533
655421
Alphaproteobacteria
GGT
Thr
>WENV170499167
CEVT01122693
218220
Alphaproteobacteria
>WENV170498460
CEVT01039017
656001
Alphaproteobacteria
GCC
Gly
>WENV170498911
CEVT01089271
218119
Alphaproteobacteria
>WENV170500219
CEVT01379890
49736
Alphaproteobacteria
TGA
Ser
>WENV170498969
CEVT01096171
654987
Alphaproteobacteria
GAC
Val
>WENV170498770
CEVT01070644
456498
Alphaproteobacteria
CAT
Met
>WENV170498935
CEVT01091976
779636
Alphaproteobacteria
CTG
Gln
>WENV170499225
CEVT01130808
454059
Alphaproteobacteria
TTT
Lys
>WENV170499766
CEVT01185826
180749
Alphaproteobacteria
TAG
Leu
>WENV170499310
CEVT01143535
463649
Alphaproteobacteria
GAA
Phe
>WENV170498505
CEVT01043167
270796
Alphaproteobacteria
GTC
Asp
>WENV170499428
CEVT01158325
270897
Alphaproteobacteria
CCT
Arg
>WENV170498813
CEVT01075129
113889
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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