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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170500398
CEVU01011060
270982
Gammaproteobacteria
GAT
Ile
>WENV170500898
CEVU01057297
270982
Gammaproteobacteria
GAT
Ile
>WENV170501332
CEVU01106581
270982
Gammaproteobacteria
GAT
Ile
>WENV170500695
CEVU01038781
272023
Gammaproteobacteria
GAT
Ile
>WENV170501669
CEVU01147606
456247
Gammaproteobacteria
CCA
Trp
>WENV170501156
CEVU01083162
457171
Gammaproteobacteria
GTT
Asn
>WENV170501874
CEVU01168741
274148
Gammaproteobacteria
GTC
Asp
>WENV170501753
CEVU01157793
459731
Gammaproteobacteria
GGT
Thr
>WENV170500601
CEVU01028010
452881
Gammaproteobacteria
TGT
Thr
>WENV170500393
CEVU01010562
296667
Gammaproteobacteria
GAT
Ile
>WENV170500394
CEVU01010562
452602
Gammaproteobacteria
TGC
Ala
>WENV170501951
CEVU01174311
459319
Gammaproteobacteria
GAA
Phe
>WENV170500854
CEVU01053718
454397
Gammaproteobacteria
TGT
Thr
>WENV170501250
CEVU01095390
284508
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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