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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170519511
CEWE01241401
457453
Gammaproteobacteria
TTT
Lys
>WENV170519081
CEWE01202154
274166
Gammaproteobacteria
GAC
Val
>WENV170516982
CEWE01001354
270982
Gammaproteobacteria
GAT
Ile
>WENV170518269
CEWE01108710
270982
Gammaproteobacteria
GAT
Ile
>WENV170519435
CEWE01236532
456706
Gammaproteobacteria
TGT
Thr
>WENV170520123
CEWE01345642
276974
Gammaproteobacteria
GGG
Pro
>WENV170519095
CEWE01203444
456247
Gammaproteobacteria
CCA
Trp
>WENV170519363
CEWE01229752
502832
Gammaproteobacteria
GAA
Phe
>WENV170519784
CEWE01257900
275003
Gammaproteobacteria
CAT
Met
>WENV170517708
CEWE01055232
276971
Gammaproteobacteria
ACG
Arg
>WENV170518774
CEWE01161272
274864
Gammaproteobacteria
ACG
Arg
>WENV170519613
CEWE01248214
780642
Gammaproteobacteria
GCA
Cys
>WENV170520517
CEWE01517721
452332
Gammaproteobacteria
GTG
His
>WENV170519716
CEWE01254470
282413
Gammaproteobacteria
ACG
Arg
>WENV170517234
CEWE01020753
271600
Gammaproteobacteria
GAT
Ile
>WENV170517812
CEWE01063413
452412
Gammaproteobacteria
GCC
Gly
>WENV170519477
CEWE01239546
780765
Gammaproteobacteria
CCC
Gly
>WENV170518517
CEWE01133215
456510
Gammaproteobacteria
GGC
Ala
>WENV170519096
CEWE01203567
301313
Gammaproteobacteria
TGG
Pro
>WENV170519505
CEWE01240850
271613
Gammaproteobacteria
GTC
Asp
>WENV170520316
CEWE01456124
452405
Gammaproteobacteria
GGT
Thr
>WENV170517745
CEWE01058088
291687
Gammaproteobacteria
TCT
Arg
>WENV170518353
CEWE01117618
454397
Gammaproteobacteria
TGT
Thr
>WENV170517328
CEWE01027228
454397
Gammaproteobacteria
TGT
Thr
>WENV170517744
CEWE01058088
276975
Gammaproteobacteria
TGG
Pro
>WENV170518750
CEWE01159672
276372
Gammaproteobacteria
ACG
Arg
>WENV170519864
CEWE01261193
452407
Gammaproteobacteria
GAA
Phe
>WENV170518540
CEWE01135971
274093
Gammaproteobacteria
GTC
Asp
>WENV170517707
CEWE01055232
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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