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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170520721
CEWF01002820
275457
Gammaproteobacteria
ACG
Arg
>WENV170520852
CEWF01021023
275457
Gammaproteobacteria
ACG
Arg
>WENV170520963
CEWF01042953
454867
Gammaproteobacteria
GTG
His
>WENV170520723
CEWF01003238
271464
Gammaproteobacteria
TGG
Pro
>WENV170521148
CEWF01099534
282342
Gammaproteobacteria
CAT
Met
>WENV170520880
CEWF01026182
656944
Gammaproteobacteria
CCT
Arg
>WENV170521037
CEWF01054650
653594
Gammaproteobacteria
CCT
Arg
>WENV170520936
CEWF01038821
456706
Gammaproteobacteria
TGT
Thr
>WENV170520827
CEWF01018110
502832
Gammaproteobacteria
GAA
Phe
>WENV170520755
CEWF01006594
30865
Gammaproteobacteria
GCT
Ser
>WENV170521196
CEWF01122974
451784
Gammaproteobacteria
GAA
Phe
>WENV170520726
CEWF01003344
45751
Gammaproteobacteria
GGA
Ser
>WENV170520822
CEWF01017191
273844
Gammaproteobacteria
CCG
Arg
>WENV170520849
CEWF01020878
180499
Gammaproteobacteria
GTA
Tyr
>WENV170520931
CEWF01036837
276973
Gammaproteobacteria
GAC
Val
>WENV170520928
CEWF01035985
452332
Gammaproteobacteria
GTG
His
>WENV170520777
CEWF01010366
179997
Gammaproteobacteria
GTA
Tyr
>WENV170520773
CEWF01009973
271600
Gammaproteobacteria
GAT
Ile
>WENV170521050
CEWF01055376
278982
Gammaproteobacteria
CCG
Arg
>WENV170520821
CEWF01017129
452412
Gammaproteobacteria
GCC
Gly
>WENV170520926
CEWF01034970
218101
Gammaproteobacteria
GTA
Tyr
>WENV170521264
CEWF01144154
30520
Gammaproteobacteria
TGA
Ser
>WENV170521043
CEWF01055005
179999
Gammaproteobacteria
CAA
Leu
>WENV170520932
CEWF01038275
781121
Gammaproteobacteria
GCA
Cys
>WENV170520727
CEWF01003414
273869
Gammaproteobacteria
GTT
Asn
>WENV170520991
CEWF01048183
273754
Gammaproteobacteria
GTT
Asn
>WENV170520795
CEWF01013168
452377
Gammaproteobacteria
GTT
Asn
>WENV170521060
CEWF01055743
45712
Gammaproteobacteria
GGA
Ser
>WENV170521289
CEWF01148404
86900
Gammaproteobacteria
TGA
Ser
>WENV170520835
CEWF01019617
454969
Gammaproteobacteria
GTT
Asn
>WENV170520801
CEWF01013498
273121
Gammaproteobacteria
GAC
Val
>WENV170521052
CEWF01055466
276972
Gammaproteobacteria
CCA
Trp
>WENV170521023
CEWF01052805
276972
Gammaproteobacteria
CCA
Trp
>WENV170520831
CEWF01018788
276972
Gammaproteobacteria
CCA
Trp
>WENV170520729
CEWF01003676
273852
Gammaproteobacteria
GTC
Asp
>WENV170520992
CEWF01048255
457459
Gammaproteobacteria
GGC
Ala
>WENV170520747
CEWF01005536
454397
Gammaproteobacteria
TGT
Thr
>WENV170520939
CEWF01039764
112814
Gammaproteobacteria
GAG
Leu
>WENV170520819
CEWF01016969
276970
Gammaproteobacteria
CCG
Arg
>WENV170521068
CEWF01055844
779494
Gammaproteobacteria
GCA
Cys
>WENV170520737
CEWF01004665
451870
Gammaproteobacteria
CCA
Trp
>WENV170520996
CEWF01048648
271316
Gammaproteobacteria
CAT
Met
>WENV170520760
CEWF01007171
30792
Gammaproteobacteria
GGA
Ser
>WENV170520940
CEWF01039764
271253
Gammaproteobacteria
CAT
Met
>WENV170520816
CEWF01016463
270904
Gammaproteobacteria
CGG
Pro
>WENV170520817
CEWF01016467
117395
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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