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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170526804
CEWI01074650
454866
Gammaproteobacteria
TAC
Val
>WENV170526721
CEWI01062836
656944
Gammaproteobacteria
CCT
Arg
>WENV170526134
CEWI01008182
270982
Gammaproteobacteria
GAT
Ile
>WENV170526326
CEWI01023031
270982
Gammaproteobacteria
GAT
Ile
>WENV170527257
CEWI01132144
276974
Gammaproteobacteria
GGG
Pro
>WENV170526190
CEWI01011862
276971
Gammaproteobacteria
ACG
Arg
>WENV170526379
CEWI01027444
451982
Gammaproteobacteria
GGC
Ala
>WENV170526764
CEWI01069294
273749
Gammaproteobacteria
CCA
Trp
>WENV170527076
CEWI01108231
276973
Gammaproteobacteria
GAC
Val
>WENV170527349
CEWI01139545
278982
Gammaproteobacteria
CCG
Arg
>WENV170526506
CEWI01040143
452412
Gammaproteobacteria
GCC
Gly
>WENV170526850
CEWI01080440
781121
Gammaproteobacteria
GCA
Cys
>WENV170526245
CEWI01017262
458525
Gammaproteobacteria
TAC
Val
>WENV170527207
CEWI01126700
276972
Gammaproteobacteria
CCA
Trp
>WENV170526280
CEWI01020191
276972
Gammaproteobacteria
CCA
Trp
>WENV170527669
CEWI01249317
276970
Gammaproteobacteria
CCG
Arg
>WENV170527210
CEWI01127286
276372
Gammaproteobacteria
ACG
Arg
>WENV170526690
CEWI01059171
30792
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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