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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170528598
CEWJ01056869
271464
Gammaproteobacteria
TGG
Pro
>WENV170528992
CEWJ01093840
656944
Gammaproteobacteria
CCT
Arg
>WENV170528765
CEWJ01072209
270982
Gammaproteobacteria
GAT
Ile
>WENV170528722
CEWJ01067481
276974
Gammaproteobacteria
GGG
Pro
>WENV170529087
CEWJ01101544
276974
Gammaproteobacteria
GGG
Pro
>WENV170528666
CEWJ01062705
298951
Gammaproteobacteria
GAT
Ile
>WENV170528298
CEWJ01033241
86880
Gammaproteobacteria
GGA
Ser
>WENV170527912
CEWJ01008002
276971
Gammaproteobacteria
ACG
Arg
>WENV170528792
CEWJ01074233
452416
Gammaproteobacteria
TTT
Lys
>WENV170529110
CEWJ01103224
276973
Gammaproteobacteria
GAC
Val
>WENV170527924
CEWJ01009141
276973
Gammaproteobacteria
GAC
Val
>WENV170529711
CEWJ01143811
278982
Gammaproteobacteria
CCG
Arg
>WENV170529003
CEWJ01094569
278982
Gammaproteobacteria
CCG
Arg
>WENV170529413
CEWJ01130876
452412
Gammaproteobacteria
GCC
Gly
>WENV170528597
CEWJ01056858
452412
Gammaproteobacteria
GCC
Gly
>WENV170528560
CEWJ01054292
452412
Gammaproteobacteria
GCC
Gly
>WENV170528495
CEWJ01048997
452412
Gammaproteobacteria
GCC
Gly
>WENV170528145
CEWJ01020579
452412
Gammaproteobacteria
GCC
Gly
>WENV170528273
CEWJ01031375
275658
Gammaproteobacteria
TGG
Pro
>WENV170529041
CEWJ01097142
113485
Gammaproteobacteria
CAA
Leu
>WENV170529709
CEWJ01143722
276972
Gammaproteobacteria
CCA
Trp
>WENV170529538
CEWJ01139298
276972
Gammaproteobacteria
CCA
Trp
>WENV170528201
CEWJ01024611
276972
Gammaproteobacteria
CCA
Trp
>WENV170528293
CEWJ01032872
276972
Gammaproteobacteria
CCA
Trp
>WENV170529151
CEWJ01106953
276972
Gammaproteobacteria
CCA
Trp
>WENV170528133
CEWJ01019844
453897
Gammaproteobacteria
TAC
Val
>WENV170528366
CEWJ01037399
276970
Gammaproteobacteria
CCG
Arg
>WENV170528784
CEWJ01073522
459406
Gammaproteobacteria
TAC
Val
>WENV170528783
CEWJ01073522
459406
Gammaproteobacteria
TAC
Val
>WENV170529420
CEWJ01131083
276372
Gammaproteobacteria
ACG
Arg
>WENV170529319
CEWJ01124723
30792
Gammaproteobacteria
GGA
Ser
>WENV170528551
CEWJ01053484
274093
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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