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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170544231
CXRH01000005
451658
Actinobacteria
CCG
Arg
>WENV170544257
CXRH01000036
451405
Actinobacteria
CTC
Glu
>WENV170544246
CXRH01000024
270710
Actinobacteria
CAT
Met
>WENV170544239
CXRH01000010
451412
Actinobacteria
GTT
Asn
>WENV170544233
CXRH01000006
451359
Actinobacteria
TTT
Lys
>WENV170544237
CXRH01000008
87304
Actinobacteria
TGA
Ser
>WENV170544242
CXRH01000014
270486
Actinobacteria
CGG
Pro
>WENV170544240
CXRH01000010
454262
Actinobacteria
GTT
Asn
>WENV170544247
CXRH01000024
451659
Actinobacteria
CCT
Arg
>WENV170544238
CXRH01000009
273894
Actinobacteria
TAC
Val
>WENV170544241
CXRH01000011
451655
Actinobacteria
CCA
Trp
>WENV170544251
CXRH01000027
451474
Actinobacteria
CAC
Val
>WENV170544267
CXRH01000051
451474
Actinobacteria
CAC
Val
>WENV170544250
CXRH01000027
653394
Actinobacteria
GAC
Val
>WENV170544266
CXRH01000051
653394
Actinobacteria
GAC
Val
>WENV170544222
CXRH01000003
779444
Actinobacteria
TTG
Gln
>WENV170544268
CXRH01000056
153702
Actinobacteria
CAG
Leu
>WENV170544221
CXRH01000001
45685
Actinobacteria
GCT
Ser
>WENV170544229
CXRH01000005
217997
Actinobacteria
TAG
Leu
>WENV170544226
CXRH01000003
270704
Actinobacteria
ACG
Arg
>WENV170544227
CXRH01000003
270704
Actinobacteria
ACG
Arg
>WENV170544249
CXRH01000027
779447
Actinobacteria
GCA
Cys
>WENV170544223
CXRH01000003
270422
Actinobacteria
TGG
Pro
>WENV170544224
CXRH01000003
270417
Actinobacteria
CAA
Leu
>WENV170544258
CXRH01000036
653479
Actinobacteria
CTG
Gln
>WENV170544254
CXRH01000035
270707
Actinobacteria
GAT
Ile
>WENV170544245
CXRH01000023
228603
Actinobacteria
TAA
Leu
>WENV170544243
CXRH01000015
451469
Actinobacteria
GTG
His
>WENV170544256
CXRH01000036
86885
Actinobacteria
GGA
Ser
>WENV170544269
CXRH01000056
780405
Actinobacteria
CCC
Gly
>WENV170544228
CXRH01000005
451455
Actinobacteria
CGT
Thr
>WENV170544234
CXRH01000006
270708
Actinobacteria
CTT
Lys
>WENV170544235
CXRH01000007
270706
Actinobacteria
TGT
Thr
>WENV170544271
CXRH01000071
653480
Actinobacteria
TTC
Glu
>WENV170544220
CXRH01000001
270545
Actinobacteria
CAT
Met
>WENV170544255
CXRH01000035
451443
Actinobacteria
TGC
Ala
>WENV170544253
CXRH01000027
270711
Actinobacteria
GGG
Pro
>WENV170544244
CXRH01000016
30568
Actinobacteria
GAG
Leu
>WENV170544263
CXRH01000039
270705
Actinobacteria
TCT
Arg
>WENV170544236
CXRH01000008
87303
Actinobacteria
CGA
Ser
>WENV170544225
CXRH01000003
451657
Actinobacteria
GGC
Ala
>WENV170544274
CXRH01000092
451657
Actinobacteria
GGC
Ala
>WENV170544275
CXRH01000092
451657
Actinobacteria
GGC
Ala
>WENV170544219
CXRH01000001
179947
Actinobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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