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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549700
CXVH01000606
451658
Actinobacteria
CCG
Arg
>WENV170549727
CXVH01001470
451405
Actinobacteria
CTC
Glu
>WENV170549732
CXVH01001604
270710
Actinobacteria
CAT
Met
>WENV170549735
CXVH01001705
451412
Actinobacteria
GTT
Asn
>WENV170549685
CXVH01000110
451359
Actinobacteria
TTT
Lys
>WENV170549680
CXVH01000079
87304
Actinobacteria
TGA
Ser
>WENV170549688
CXVH01000471
451659
Actinobacteria
CCT
Arg
>WENV170549677
CXVH01000037
273894
Actinobacteria
TAC
Val
>WENV170549708
CXVH01000900
451655
Actinobacteria
CCA
Trp
>WENV170549706
CXVH01000897
451474
Actinobacteria
CAC
Val
>WENV170549741
CXVH01001966
451474
Actinobacteria
CAC
Val
>WENV170549744
CXVH01002051
451474
Actinobacteria
CAC
Val
>WENV170549740
CXVH01001966
653394
Actinobacteria
GAC
Val
>WENV170549743
CXVH01002051
653394
Actinobacteria
GAC
Val
>WENV170549709
CXVH01000938
779444
Actinobacteria
TTG
Gln
>WENV170549765
CXVH01003088
153702
Actinobacteria
CAG
Leu
>WENV170549681
CXVH01000097
45685
Actinobacteria
GCT
Ser
>WENV170549720
CXVH01001014
217997
Actinobacteria
TAG
Leu
>WENV170549704
CXVH01000859
270704
Actinobacteria
ACG
Arg
>WENV170549766
CXVH01003433
270704
Actinobacteria
ACG
Arg
>WENV170549739
CXVH01001966
779447
Actinobacteria
GCA
Cys
>WENV170549726
CXVH01001439
270422
Actinobacteria
TGG
Pro
>WENV170549731
CXVH01001581
270417
Actinobacteria
CAA
Leu
>WENV170549728
CXVH01001470
653479
Actinobacteria
CTG
Gln
>WENV170549701
CXVH01000627
270707
Actinobacteria
GAT
Ile
>WENV170549703
CXVH01000808
228603
Actinobacteria
TAA
Leu
>WENV170549697
CXVH01000548
451469
Actinobacteria
GTG
His
>WENV170549687
CXVH01000300
86885
Actinobacteria
GGA
Ser
>WENV170549721
CXVH01001042
780405
Actinobacteria
CCC
Gly
>WENV170549719
CXVH01001014
451455
Actinobacteria
CGT
Thr
>WENV170549722
CXVH01001091
270708
Actinobacteria
CTT
Lys
>WENV170549690
CXVH01000493
270706
Actinobacteria
TGT
Thr
>WENV170549724
CXVH01001415
653480
Actinobacteria
TTC
Glu
>WENV170549767
CXVH01003585
653480
Actinobacteria
TTC
Glu
>WENV170549734
CXVH01001646
270545
Actinobacteria
CAT
Met
>WENV170549699
CXVH01000605
30568
Actinobacteria
GAG
Leu
>WENV170549698
CXVH01000587
270705
Actinobacteria
TCT
Arg
>WENV170549682
CXVH01000103
87303
Actinobacteria
CGA
Ser
>WENV170549725
CXVH01001416
451657
Actinobacteria
GGC
Ala
>WENV170549745
CXVH01002114
451657
Actinobacteria
GGC
Ala
>WENV170549733
CXVH01001646
179947
Actinobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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