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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550664
CXWF01010887
271456
Gammaproteobacteria
ACG
Arg
>WENV170550580
CXWF01002070
114536
Gammaproteobacteria
CAA
Leu
>WENV170550727
CXWF01017756
112371
Gammaproteobacteria
CAA
Leu
>WENV170550749
CXWF01021481
112813
Gammaproteobacteria
CAG
Leu
>WENV170550863
CXWF01040766
271200
Gammaproteobacteria
CAT
Met
>WENV170550987
CXWF01062545
278942
Gammaproteobacteria
CCG
Arg
>WENV170550997
CXWF01063212
273844
Gammaproteobacteria
CCG
Arg
>WENV170550918
CXWF01049293
273847
Gammaproteobacteria
CCT
Arg
>WENV170550790
CXWF01027177
273859
Gammaproteobacteria
CGG
Pro
>WENV170550993
CXWF01062694
275465
Gammaproteobacteria
GAC
Val
>WENV170550741
CXWF01020614
273856
Gammaproteobacteria
GAC
Val
>WENV170550960
CXWF01056752
12379
Gammaproteobacteria
GCT
Ser
>WENV170550816
CXWF01032827
87214
Gammaproteobacteria
GGA
Ser
>WENV170550959
CXWF01056412
273845
Gammaproteobacteria
GGG
Pro
>WENV170550629
CXWF01005923
273851
Gammaproteobacteria
GTC
Asp
>WENV170550626
CXWF01005923
273852
Gammaproteobacteria
GTC
Asp
>WENV170550627
CXWF01005923
273852
Gammaproteobacteria
GTC
Asp
>WENV170550670
CXWF01011627
275288
Gammaproteobacteria
GTC
Asp
>WENV170550908
CXWF01048278
486408
Gammaproteobacteria
GTT
Asn
>WENV170550584
CXWF01002440
454969
Gammaproteobacteria
GTT
Asn
>WENV170550628
CXWF01005923
454968
Gammaproteobacteria
TAC
Val
>WENV170550978
CXWF01060064
453897
Gammaproteobacteria
TAC
Val
>WENV170551014
CXWF01067579
180498
Gammaproteobacteria
TAG
Leu
>WENV170550588
CXWF01003132
273858
Gammaproteobacteria
TCT
Arg
>WENV170550796
CXWF01028292
30520
Gammaproteobacteria
TGA
Ser
>WENV170550555
CXWF01001033
452404
Gammaproteobacteria
TGT
Thr
>WENV170550924
CXWF01050587
452414
Gammaproteobacteria
TTC
Glu
>WENV170550831
CXWF01034906
454967
Gammaproteobacteria
TTT
Lys
>WENV170550891
CXWF01045213
452416
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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