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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170551154
CXWJ01000616
297043
Betaproteobacteria
CAT
Met
>WENV170551988
CXWJ01033288
452701
Betaproteobacteria
CCA
Trp
>WENV170551153
CXWJ01000615
463660
Betaproteobacteria
CCA
Trp
>WENV170551538
CXWJ01011550
477700
Betaproteobacteria
GCC
Gly
>WENV170551377
CXWJ01005966
288758
Betaproteobacteria
TTG
Gln
>WENV170551805
CXWJ01023969
288758
Betaproteobacteria
TTG
Gln
>WENV170552160
CXWJ01041977
288758
Betaproteobacteria
TTG
Gln
>WENV170552301
CXWJ01053815
288758
Betaproteobacteria
TTG
Gln
>WENV170551295
CXWJ01003224
454119
Betaproteobacteria
CGC
Ala
>WENV170551610
CXWJ01014976
454227
Betaproteobacteria
GTG
His
>WENV170552091
CXWJ01038235
273219
Betaproteobacteria
TCT
Arg
>WENV170551207
CXWJ01001373
454252
Betaproteobacteria
CGC
Ala
>WENV170551322
CXWJ01004211
282032
Betaproteobacteria
GGG
Pro
>WENV170551493
CXWJ01009541
465080
Betaproteobacteria
GGC
Ala
>WENV170551806
CXWJ01024011
12285
Betaproteobacteria
GCT
Ser
>WENV170551367
CXWJ01005592
469156
Betaproteobacteria
CGT
Thr
>WENV170551353
CXWJ01005295
283584
Betaproteobacteria
CAT
Met
>WENV170551704
CXWJ01018356
292945
Betaproteobacteria
CAT
Met
>WENV170551508
CXWJ01010259
454245
Betaproteobacteria
CTT
Lys
>WENV170551818
CXWJ01024412
289669
Betaproteobacteria
GAT
Ile
>WENV170552017
CXWJ01034502
457604
Betaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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