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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170552579
CXWK01000469
273543
Alphaproteobacteria
ACG
Arg
>WENV170553120
CXWK01008356
276075
Alphaproteobacteria
GTG
His
>WENV170552695
CXWK01001023
287555
Alphaproteobacteria
CAT
Met
>WENV170552855
CXWK01002792
180423
Alphaproteobacteria
CAA
Leu
>WENV170553904
CXWK01037222
180388
Alphaproteobacteria
TAG
Leu
>WENV170552943
CXWK01004355
463196
Alphaproteobacteria
CAT
Met
>WENV170552790
CXWK01002048
457350
Alphaproteobacteria
CTT
Lys
>WENV170553264
CXWK01012896
457364
Alphaproteobacteria
TGT
Thr
>WENV170553858
CXWK01034816
180414
Alphaproteobacteria
CAG
Leu
>WENV170553289
CXWK01013554
653813
Alphaproteobacteria
GAC
Val
>WENV170552851
CXWK01002756
45932
Alphaproteobacteria
GGA
Ser
>WENV170554284
CXWK01059445
653591
Alphaproteobacteria
TTG
Gln
>WENV170554270
CXWK01058101
654523
Alphaproteobacteria
GTT
Asn
>WENV170553606
CXWK01025226
663664
Alphaproteobacteria
GAC
Val
>WENV170552708
CXWK01001172
663664
Alphaproteobacteria
GAC
Val
>WENV170554417
CXWK01068264
454489
Alphaproteobacteria
CGC
Ala
>WENV170553155
CXWK01009287
660380
Alphaproteobacteria
GGT
Thr
>WENV170554218
CXWK01054361
307694
Alphaproteobacteria
ACG
Arg
>WENV170553112
CXWK01008024
474526
Alphaproteobacteria
TAC
Val
>WENV170553519
CXWK01021999
182437
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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