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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170559024
CXWL01106665
653537
Alphaproteobacteria
GGT
Thr
>WENV170556177
CXWL01005431
273448
Alphaproteobacteria
CGG
Pro
>WENV170555406
CXWL01000501
455173
Alphaproteobacteria
GAA
Phe
>WENV170555681
CXWL01001730
455173
Alphaproteobacteria
GAA
Phe
>WENV170557396
CXWL01025866
653534
Alphaproteobacteria
GCC
Gly
>WENV170555423
CXWL01000579
654960
Alphaproteobacteria
CTC
Glu
>WENV170555541
CXWL01000961
654960
Alphaproteobacteria
CTC
Glu
>WENV170556137
CXWL01005137
654960
Alphaproteobacteria
CTC
Glu
>WENV170557429
CXWL01026871
454180
Alphaproteobacteria
CGT
Thr
>WENV170556240
CXWL01005987
655270
Alphaproteobacteria
GAA
Phe
>WENV170558252
CXWL01059596
780044
Alphaproteobacteria
TCC
Gly
>WENV170555602
CXWL01001332
451742
Alphaproteobacteria
GGC
Ala
>WENV170557512
CXWL01028723
654987
Alphaproteobacteria
GAC
Val
>WENV170555601
CXWL01001321
655363
Alphaproteobacteria
GGT
Thr
>WENV170555324
CXWL01000149
274223
Alphaproteobacteria
CCG
Arg
>WENV170555629
CXWL01001510
270775
Alphaproteobacteria
ACG
Arg
>WENV170556204
CXWL01005612
270775
Alphaproteobacteria
ACG
Arg
>WENV170558926
CXWL01100421
661074
Alphaproteobacteria
GCC
Gly
>WENV170556018
CXWL01003908
661074
Alphaproteobacteria
GCC
Gly
>WENV170555320
CXWL01000137
653518
Alphaproteobacteria
GAC
Val
>WENV170555429
CXWL01000581
653518
Alphaproteobacteria
GAC
Val
>WENV170557481
CXWL01028068
653518
Alphaproteobacteria
GAC
Val
>WENV170556972
CXWL01016945
273160
Alphaproteobacteria
ACG
Arg
>WENV170555657
CXWL01001642
780039
Alphaproteobacteria
GCA
Cys
>WENV170555744
CXWL01002027
780039
Alphaproteobacteria
GCA
Cys
>WENV170556241
CXWL01006004
270777
Alphaproteobacteria
CAT
Met
>WENV170556297
CXWL01006833
270777
Alphaproteobacteria
CAT
Met
>WENV170557202
CXWL01021301
270777
Alphaproteobacteria
CAT
Met
>WENV170556086
CXWL01004693
452566
Alphaproteobacteria
TTT
Lys
>WENV170557407
CXWL01026081
452566
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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