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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170568033
FLMP01013832
273797
Alphaproteobacteria
GGG
Pro
>WENV170567327
FLMP01000031
452917
Alphaproteobacteria
TAC
Val
>WENV170568235
FLMP01023702
452884
Alphaproteobacteria
CCA
Trp
>WENV170568283
FLMP01027465
452884
Alphaproteobacteria
CCA
Trp
>WENV170569509
FLMP01220190
452884
Alphaproteobacteria
CCA
Trp
>WENV170568480
FLMP01043706
653534
Alphaproteobacteria
GCC
Gly
>WENV170569882
FLMP01341095
653534
Alphaproteobacteria
GCC
Gly
>WENV170567469
FLMP01000757
656001
Alphaproteobacteria
GCC
Gly
>WENV170568874
FLMP01090740
656001
Alphaproteobacteria
GCC
Gly
>WENV170569286
FLMP01162887
656001
Alphaproteobacteria
GCC
Gly
>WENV170569510
FLMP01220190
656001
Alphaproteobacteria
GCC
Gly
>WENV170569704
FLMP01275901
656001
Alphaproteobacteria
GCC
Gly
>WENV170568600
FLMP01054206
218119
Alphaproteobacteria
>WENV170568135
FLMP01019015
218119
Alphaproteobacteria
>WENV170567669
FLMP01003353
218119
Alphaproteobacteria
>WENV170567470
FLMP01000757
218119
Alphaproteobacteria
>WENV170568966
FLMP01103064
277700
Alphaproteobacteria
GTG
His
>WENV170567482
FLMP01000888
653532
Alphaproteobacteria
GTT
Asn
>WENV170567965
FLMP01011249
653532
Alphaproteobacteria
GTT
Asn
>WENV170568634
FLMP01058036
653532
Alphaproteobacteria
GTT
Asn
>WENV170570335
FLMP01529198
653532
Alphaproteobacteria
GTT
Asn
>WENV170567857
FLMP01007630
180720
Alphaproteobacteria
TAG
Leu
>WENV170568651
FLMP01060630
275155
Alphaproteobacteria
GGG
Pro
>WENV170568858
FLMP01087650
455363
Alphaproteobacteria
GGC
Ala
>WENV170567593
FLMP01002188
275157
Alphaproteobacteria
TGG
Pro
>WENV170567959
FLMP01011117
271956
Alphaproteobacteria
CAT
Met
>WENV170569205
FLMP01146987
218137
Alphaproteobacteria
TAG
Leu
>WENV170568397
FLMP01036538
218137
Alphaproteobacteria
TAG
Leu
>WENV170568095
FLMP01016942
780582
Alphaproteobacteria
TCC
Gly
>WENV170568064
FLMP01015185
780582
Alphaproteobacteria
TCC
Gly
>WENV170569471
FLMP01211875
274225
Alphaproteobacteria
CAT
Met
>WENV170570233
FLMP01478786
779596
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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